EY693185

Overview
NameEY693185
Unique NameEY693185
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY693185 vs. ExPASy Swiss-Prot
Match: AB7I_ARATH (Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.531e-40
Identity = 100/230 (43.48%), Postives = 138/230 (60.00%), Query Frame = 3 
Query:  162 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQIAESLEDXXXXXXXXXXXXXXXXKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPERVYVGSLLGVSDGIMKRASDFISEFQCGDLFCPLMGWG---LLI*GIYVPQAVRKESH-YLKTY--QLRGKCDPKITLSNPRGXFVEEE 824
            N++  PKL   RR     + V  Q     A+FSDPFV+Q+AESLED                ++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+   R S  LD  T+ QF + V+IDGF+ N  +  S+LP+ VY G   G+ D +  R S+FI  F  GDLF  + G G   L++  IYVP+  + E+  YL+ +  +   +   ++ +SNPR   + EE
Sbjct:   15 NLSSKPKLKSNRRTTSTSVSVRAQ-----ASFSDPFVLQLAESLEDSLSASPSSSLPLQ---RIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFTNAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGAPDLMV--IYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEE 234
The following BLAST results are available for this feature:
BLAST of EY693185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AB7I_ARATH4.531e-4043.48Protein ABCI7, chloroplastic OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-H02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693185 ID=EY693185; Name=EY693185; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTGTCTGGTCACAAC
AACAACACACTTCATCCAGATCCCAATCTATGTATAATCTAATCTATTAA
CAGCAAACACCATCATCATTCATCAATGTCTGCACTTTCATTCTCACCAC
ATCTTCACATAAACATAAACAGAAACCCCAAACTCACTCCAAAACGAAGA
GCTAAACCCAACAAGATCAGAGTTTCACTGCAAACAACTTTTCCACAAGC
CACCTTTTCAGACCCTTTTGTGATCCAGATAGCAGAGTCCCTTGAAGACT
CTCTCCCCTCATCATCATCATCTTTACCGCAGCCTTTGCCTCTCCAGAAA
CTTCGAGACTCTTCCTCACAAACCCTCCTGTCAACCCCTTGGCCTTCTCG
CAAAGATGAACCTTTTCGCTTCACTGACACTTCAATGATCAAAAGCTCCC
AAATTCAACCCATTACTCGTCCTTCTTCTTCATTGGATGTTTCAACCGAT
GCCCAGTTCCCTAGTCTTGTTCTTATTGATGGGTTTATCCAAAATTCCGC
TTTGAATTTGTCAAATTTACCTGAACGGGTCTATGTTGGCAGCTTATTAG
GTGTATCTGATGGGATTATGAAGAGGGCTAGTGATTTTATAAGTGAATTT
CAATGTGGNGATTTGTTTTGCCCATTAATGGGATGGGGGCTCCTGATTTA
GGGTATTTATGTCCCGCAAGCTGTAAGGAAAGAATCCCATTATTTGAAGA
CCTATCAGTTGAGGGGGAAATGTGATCCGAAAATTACCCTTTCAAATCCT
AGGGGGTNTTTTGTTGAAGAAGAAGAAAGCCTTAAAATGAAAATTCCTGG
CCAAAAGGTATGACGGTCTGGGGAATTCCCTTTGAGGGGGATGGAAAAGG
AAAAGT
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