EY693181

Overview
NameEY693181
Unique NameEY693181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 8.002e-109
Identity = 190/226 (84.07%), Postives = 203/226 (89.82%), Query Frame = 3
Query:  102 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            F GKAV L+PS +E++  GR++MRKT +K+   SSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG PLGEV DPLYP GSFDP GLADDPEAFAELKVKE +NG +AM S  G   QAIVTG+
Sbjct:   13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238          
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 1.045e-108
Identity = 189/226 (83.63%), Postives = 204/226 (90.27%), Query Frame = 3
Query:  102 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            F GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV DPLYP GSFDP GLA+DPEAFAELKVKE +NG +AM S  G   QAIVTG+
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238          
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 1.365e-108
Identity = 189/226 (83.63%), Postives = 204/226 (90.27%), Query Frame = 3
Query:  102 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            F GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV DPLYP GSFDP GLA+DPEAFAELKVKE +NG +AM S  G   QAIVTG+
Sbjct:   12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237          
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 5.187e-108
Identity = 188/224 (83.93%), Postives = 200/224 (89.29%), Query Frame = 3
Query:  102 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            F G+AV L+PS +E+S  GRI+MRK  +KS  S SPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG PLGEV DPLYP GSFDP GLA+DPEAFAELKVKE +NG +AM S  G   QAIVTG+
Sbjct:   13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236          
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 5.187e-108
Identity = 187/226 (82.74%), Postives = 204/226 (90.27%), Query Frame = 3
Query:  102 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            F GKAV L+PS +E++  G+++MRKT +K+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV DPLYP GSFDP GLA+DPEAFAELKVKE +NG +AM S  G   QA+VTG+
Sbjct:   12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGK 237          
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 5.187e-108
Identity = 186/224 (83.04%), Postives = 201/224 (89.73%), Query Frame = 3
Query:  102 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            F G+AV L+PS  E++  GR+SMRKT +K V+S SPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AG PLGEV DPLYP GSFDP GLA+DPEAFAELKVKE +NG +AM S  G   QAIVTG+
Sbjct:   13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236          
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 6.774e-108
Identity = 187/222 (84.23%), Postives = 200/222 (90.09%), Query Frame = 3
Query:  108 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            G+AV L+P+  E+    + +MRKT SKSVSSGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG PLGEVTDP+YP GSFDP GLADDPEAFAELKVKE +NG +AM S  G   QAIVTG+
Sbjct:    5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 226          
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.509e-107
Identity = 188/226 (83.19%), Postives = 202/226 (89.38%), Query Frame = 3
Query:  102 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            F G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AG PLGEVTDPLYP GSFDP GLADDPEAFAELKVKE +NG +AM S  G   QAIVTG+
Sbjct:   13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238          
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 4.391e-107
Identity = 186/226 (82.30%), Postives = 203/226 (89.82%), Query Frame = 3
Query:  102 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            F GKAV L+PS +E++  G+++MRKT +K+  +SSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV DPLYP GSFDP GLA+DPEAFAELKVK  +NG +AM S  G   QAIVTG+
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGK 238          
BLAST of EY693181 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 1.278e-106
Identity = 187/226 (82.74%), Postives = 201/226 (88.94%), Query Frame = 3
Query:  102 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGXPLGEVTDPLYPSGSFDPFGLADDPEAFAELKVKEXQNGXVAMXSHVGXSRQAIVTGR 773
            F GKAV  +PS +E++  G+ +MRKT +K+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV DPLYP GSFDP GLADDPEAFAELKVKE +NG +AM S  G   QAIVTG+
Sbjct:   13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238          
The following BLAST results are available for this feature:
BLAST of EY693181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
CB2G_SOLLC8.002e-10984.07Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB24_TOBAC1.045e-10883.63Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC1.365e-10883.63Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2B_SOLLC5.187e-10883.93Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB25_NICPL5.187e-10882.74Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB22_TOBAC5.187e-10883.04Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB21_CUCSA6.774e-10884.23Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB27_TOBAC1.509e-10783.19Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB25_TOBAC4.391e-10782.30Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB25_PETSP1.278e-10682.74Chlorophyll a-b binding protein 91R, chloroplastic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-G09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693181 ID=EY693181; Name=EY693181; organism=Citrus sinensis; type=EST; length=919bp
CCACGCGTCCGCTTGCTTACACAGCTTCTCTTGCTTACCCAGCTTCTGCT
TCTCAATTAAATTCCTCAATGGCAACCTCAACAATGGCTCTCTCCTCATC
ATTCGTCGGCAAGGCCGTGAACCTCGCCCCTTCAGGCAATGAGCTAAGCA
ATGGTGGCCGCATCTCCATGCGTAAAACCGGGAGCAAGTCTGTTTCTTCA
GGTAGCCCGTGGTACGGCCTAGACAGAGTCAAGTACTTGGGCCCATTCTC
TGGCGAGCCCCCAAGCTACTTGACCGGTGAGTTCCCTGGCGACTACGGTT
GGGACACAGCCGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGT
GAACTCGAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCTCTTGGATG
CGTCTTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGCCG
TATGGTTCAAGGCGGGGGCCCAGATCTTCAGCGAGGGCGGGCTTGACTAC
TTGGGGAACCCAAGCCTGATCCACGCCCAGAGCATCTTGGCCATCTGGGC
TTGCCAGGTGGTCTTGATGGGAGCCGTTGAGGGTTACAGAATTGCTGGAN
GGCCGCTCGGTGAAGTGACTGACCCATTGTACCCCAGTGGCAGCTTTGAT
CCATTTGGGTTGGCTGATGACCCCGAGGCTTTTGCTGAGCTCAAGGTTAA
GGAAANTCAGAATGGAANGGTGGCTATGNTCTCCCATGTTGGNTNNTCTC
GTCAGGCCATTGTCACCGGCAGGGACCGTTAGAGACTTGGCCCGACACTT
GNCGACCTGTCAACAACATGCCTGGGCTACGCACNACTTTGTCCCGGAAA
GGAGCTCGGGTGAAACATANTACGGGGAATTGGATGAAAGGGATGGTATG
ATGGACTCATTCACTTCAA
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