EY693138 | Citrus Genome Database

Overview


Name	EY693138
Unique Name	EY693138
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	954

Libraries


Library Name	Type
Sweet orange fruit, development stadium (1 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 4.863e-63
Identity = 76/121 (62.81%), Postives = 91/121 (75.21%), Query Frame = 1

Query:  166 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRXPIQLSW 516
            +L  IISR  FDD+L++RND  CPARGFYTYDAFI AA++FPGFG +G+   RK+EIAAFF QT HETTGGW  AP G Y+WGYCF  E +P S+YC P+  +PC     YYGR P+QLSW
Sbjct:   70 DLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSW 190

HSP 2 Score: 94.3597 bits (233), Expect = 4.863e-63
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY +C           NNPDL++ DPV++FK+AIWFWMT Q PKPSCH VI+ +W+PS  D  AGR+ GY + TNI        GG+ C
Sbjct:  191 NYNYGQCGRAIGSDLL--NNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIIN------GGLEC 273

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 6.339e-63
Identity = 74/121 (61.16%), Postives = 92/121 (76.03%), Query Frame = 1

Query:  166 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRXPIQLSW 516
            +L  IIS   FDD+L++RND  CPARGFYTY+AFI AA++FPGFG +G+   RK+E+AAFF QT HETTGGW  AP G Y+WGYCF  E +P SDYC+P+  +PC    +YYGR P+QLSW
Sbjct:   85 DLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSW 205

HSP 2 Score: 95.9005 bits (237), Expect = 6.339e-63
Identity = 48/91 (52.75%), Postives = 57/91 (62.64%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY  C           NNPDL+A D V++FK+AIWFWMTAQPPKPSCH VI  +W+PS  D  AGRL GY + TNI        GG+ C
Sbjct:  206 NYNYGLCGRAIGVDLL--NNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIIN------GGLEC 288

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.081e-62
Identity = 76/118 (64.41%), Postives = 92/118 (77.97%), Query Frame = 1

Query:  175 KIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YYGRXPIQLSW 516
            KIISR MFD +L++RN+  CPA+GFYTYDAF+ AA++FP FG +G+  +RKRE+AAF  QT HETTGGWP AP G YAWGYCF+ E +P S+YC   P YPC  GK YYGR P+QLSW
Sbjct:    4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSW 121

HSP 2 Score: 93.5893 bits (231), Expect = 1.081e-62
Identity = 46/91 (50.55%), Postives = 56/91 (61.54%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY  C            NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+   W+PSA D  AGRL GY + TN+        GG+ C
Sbjct:  122 NYNYGPCGEALRVNLL--GNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLN------GGLEC 204

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.390e-62
Identity = 74/120 (61.67%), Postives = 90/120 (75.00%), Query Frame = 1

Query:  166 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYYGRXPIQLS 513
            +LG IIS  MFD +L++RND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW  AP G YAWGYC++ E   P DYC P+  +PC    KY+GR PIQ+S
Sbjct:   79 DLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQIS 198

HSP 2 Score: 98.9821 bits (245), Expect = 2.390e-62
Identity = 49/91 (53.85%), Postives = 58/91 (63.74%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY  C           NNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PSA D  A RL G+ + TNI        GG+ C
Sbjct:  200 NYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIIN------GGLEC 282

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 9.008e-62
Identity = 74/120 (61.67%), Postives = 90/120 (75.00%), Query Frame = 1

Query:  166 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYYGRXPIQLS 513
            +LG IIS  MFD +L++RND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW  AP G YAWGYC++ E   P DYC P+  +PC    KY+GR PIQ+S
Sbjct:   74 DLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQIS 193

HSP 2 Score: 97.0561 bits (240), Expect = 9.008e-62
Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY  C           NNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PS+ D  A RL G+ + TNI        GG+ C
Sbjct:  195 NYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIIN------GGLEC 277

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.175e-60
Identity = 78/122 (63.93%), Postives = 92/122 (75.41%), Query Frame = 1

Query:  169 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YYGRXPIQLSW 516
            L  +ISRE F+ +L +RND  CPARGFYTYDAFI AA++FP F  +G++  RKREIAAF AQT HETTG  GW  AP G YAWGYC+  E++PPS YC  DPNYPC  GK Y+GR P+QLSW
Sbjct:   74 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSW 194

HSP 2 Score: 96.6709 bits (239), Expect = 2.175e-60
Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY +C           NNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++D  AGR+ GY + TNI        GG+ C
Sbjct:  195 NYNYGQCGRAIGVDLL--NNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIIN------GGLEC 277

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 2.176e-60
Identity = 78/122 (63.93%), Postives = 92/122 (75.41%), Query Frame = 1

Query:  169 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YYGRXPIQLSW 516
            L  +ISRE F+ +L +RND  CPARGFYTYDAFI AA++FP F  +G++  RKREIAAF AQT HETTG  GW  AP G YAWGYC+  E++PPS YC  DPNYPC  GK Y+GR P+QLSW
Sbjct:   52 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSW 172

HSP 2 Score: 96.6709 bits (239), Expect = 2.176e-60
Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY +C           NNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++D  AGR +GY + TNI        GG+ C
Sbjct:  173 NYNYGQCGRAIGVDLL--NNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIIN------GGLEC 255

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.699e-60
Identity = 71/121 (58.68%), Postives = 89/121 (73.55%), Query Frame = 1

Query:  166 ELGKIISREMFDDLLEYRNDERCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYYGRXPIQLS 513
            ++G +IS  MFD +L++RND  C  +  FY+Y+AFI AA++F GFG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF+ E   P DYC P+  +PC    KY+GR PIQ+S
Sbjct:   77 DIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQIS 197

HSP 2 Score: 98.9821 bits (245), Expect = 3.699e-60
Identity = 50/91 (54.95%), Postives = 58/91 (63.74%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY  C           NNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII  W+PSA D  A RL G+ + TNI        GG+ C
Sbjct:  199 NYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIIN------GGLEC 281

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.393e-59
Identity = 74/121 (61.16%), Postives = 89/121 (73.55%), Query Frame = 1

Query:  166 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCD--PNYPCR--GKYYGRXPIQLSW 516
            +L  +ISR  FD +L++RND  CPA+GFYTYDAFI AA+A+P FGN+G+   RKREIAAF  QT HETTGGW  AP G YAWGYCF+ E + PS YC   P +PC    +YYGR PIQ+SW
Sbjct:   75 DLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERN-PSTYCSATPQFPCAPGQQYYGRGPIQISW 194

HSP 2 Score: 91.6633 bits (226), Expect = 1.393e-59
Identity = 47/91 (51.65%), Postives = 55/91 (60.44%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY +C           N PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RL GY   TNI        GG+ C
Sbjct:  195 NYNYGQCGRAIGVDLL--NKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIIN------GGLEC 277

[Close]

BLAST of EY693138 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.368e-59
Identity = 74/121 (61.16%), Postives = 89/121 (73.55%), Query Frame = 1

Query:  166 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCD--PNYPCR--GKYYGRXPIQLSW 516
            +L  +ISR  FD +L++RND  CPA+GFYTYDAFI AA+A+P FGN+G+   RKREIAAF  QT HETTGGW  AP G YAWGYCF+ E + PS YC   P +PC    +YYGR PIQ+SW
Sbjct:   74 DLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERN-PSAYCSATPQFPCAPGQQYYGRGPIQISW 193

HSP 2 Score: 91.6633 bits (226), Expect = 2.368e-59
Identity = 47/91 (51.65%), Postives = 55/91 (60.44%), Query Frame = 3

Query:  516 DYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLSGYXLTTNISXVDWMWPGGMRC 788
            +YNY +C           N PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RL GY   TNI        GG+ C
Sbjct:  194 NYNYGQCGRAIGVDLL--NKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIIN------GGLEC 276

The following BLAST results are available for this feature:

BLAST of EY693138 vs. ExPASy Swiss-Prot

BLAST of EY693138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55


Match Name	E-value	Identity	Description
CHI2_BRANA	4.863e-63	62.81	Endochitinase CH25 OS=Brassica napus PE=2 SV=1	[more]
CHIB_ARATH	6.339e-63	61.16	Basic endochitinase B OS=Arabidopsis thaliana GN=C...	[more]
CHIT_CARPA	1.081e-62	64.41	Endochitinase OS=Carica papaya PE=1 SV=1	[more]
CHI1_TOBAC	2.390e-62	61.67	Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1...	[more]
CHI2_TOBAC	9.008e-62	61.67	Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1...	[more]
CHI1_GOSHI	2.175e-60	63.93	Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1	[more]
CHI2_GOSHI	2.176e-60	63.93	Endochitinase 2 (Fragment) OS=Gossypium hirsutum P...	[more]
CHI4_SOLTU	3.699e-60	58.68	Endochitinase 4 (Fragment) OS=Solanum tuberosum GN...	[more]
CHIT_PHAVU	1.393e-59	61.16	Endochitinase OS=Phaseolus vulgaris PE=1 SV=1	[more]
CHI5_PHAVU	2.368e-59	61.16	Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-700-008-C03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY693138 ID=EY693138; Name=EY693138; organism=Citrus sinensis; type=EST; length=954bp
CCACGCGTCCGTGATATCATAACTGTTGCTTTCAAAATGAGGCTTATTGG
GTCCTTACTAATTTTCTCTCTAGTTTTATCTTTTGTACTAGGAGGCTCAG
CACAGAACTGTGGAAGCGGCGTTGTGTACGGTGGACGTGATACCGGCCAT
GGGACGCATGGCGGTGAACTGGGCAAGATCATCTCAAGGGAGATGTTTGA
TGACTTGCTTGAGTATAGAAATGATGAACGATGCCCTGCCAGAGGCTTCT
ACACTTATGATGCTTTTATAGAGGCAGCCCAAGCTTTTCCAGGCTTTGGT
AACTCTGGAAATGAAACCATGCGTAAAAGAGAAATCGCTGCCTTTTTTGC
CCAAACTGGCCATGAAACTACTGGGGGATGGCCCGATGCACCTGGTGGCG
AATATGCTTGGGGATATTGCTTTATAAGCGAAGTTAGCCCTCCGTCCGAC
TACTGTGATCCTAACTATCCATGTCGAGGGAAGTACTATGGCCGANGTCC
AATTCAACTCTCTTGGATTACAATTACTTACGGTGCGGAGAAGGCCTANG
GCTANGAGAGGAGTTGTTGAACAATCCAGACCTTCTTGCTACTGATCCAG
TACTATCATTCAAGTCAGCAATCTGGTTCTGGATGACTGCACAGCCACCA
AAGCCATCGTGCCACGAAGTCATTATCGACGAATGGAAACCATCAGCAAA
TGACGTNAACGCCGGCCGGCTTTCCGGATACNGTCTAACCACAAATATAT
CNNACGTGGATTGGATGTGGCCAGGTGGGATGCGCTGTACNTACCGTATT
GGGTCTTTACACTTTCTGTGGCAGTTTGGGATCAGCCCTGTGACATCTTG
ATGCTCAACCACGACCTATGGCTTATCTGATGGCCATCTTGGGACNTCTG
ATCACTTTTAGAAATAACTTATAAGCCCTAATAAACCTTTAGGCCCCTTG
GGGG