EY693125

Overview
NameEY693125
Unique NameEY693125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_BACLD (Methionyl-tRNA formyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=fmt PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.616e-35
Identity = 83/211 (39.34%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            +VF+G+P  SV VL TL       D  +EV  +VTQP   + R + + P PV + AL RG P   +  PE+  E+A    + AL+P+L +TAA+G ILP K L+ P  G +N+H SLLP  RG AP+  A+ +G ++TGV++ + V  LDAG ++A+ ++++++      L   L   G+ LL   +P I+DGS  V  +  D+ KAT AP
Sbjct:    4 IVFMGTPDFSVPVLGTLI------DDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRRGIP---VLQPEKVREEAETDKILALEPDLIVTAAFGQILPKKLLDYPKYGCINVHASLLPELRGGAPIHYAILEGKEKTGVTIMYMVEKLDAGDMLAKVEVDIEETDNVGTLHDKLSKAGAALLSETVPRIIDGS--VTPEKQDEQKATYAP 203          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_DICTD (Methionyl-tRNA formyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=fmt PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.599e-35
Identity = 82/213 (38.50%), Postives = 126/213 (59.15%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA-GEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            +++ G+P+ S  +L+ +     SP     + A+VTQP   + RG++++ SPV  +A+ +G P   ++ PE+  G   F   +R+L PE  + A+YG I+P   LNIPP G +N+H S+LP YRGAAP++RA+ +  KETGVS+    R LD GPV A  K+ +        L + L   G+ELL+  LP I DG  ++   P ++S AT AP+
Sbjct:    3 IIYFGTPEFSRIILERI-----SP--YLNIIAVVTQPDKPKGRGKRIMCSPVKDFAISKGIP---VYQPEKLKGNKEFFEIIRSLNPEALVVASYGKIIPEDILNIPPYGGINVHASVLPKYRGAAPIERAIMNCEKETGVSIMKMERGLDTGPVYAIRKIPILPDDNRGTLSIKLAHLGAELLLEVLPLIKDG--KLSPVPQEESLATYAPK 203          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_DICT6 (Methionyl-tRNA formyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=fmt PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.047e-34
Identity = 80/213 (37.56%), Postives = 130/213 (61.03%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA-GEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            +++ G+P+ S  +L+ +++          +  IVTQP   + RG+K+LPSPV Q+A+++G     ++ PE+  G   F + ++ L+P+  I A+YG I+P   LNIPP G +N+H S+LP YRGAAP++RAL +  KETGVS+    + LD GPV A +K+ +        L + L + G++LL+  LP I +G  ++   P D+S A+ AP+
Sbjct:    3 VIYFGTPEFSRIILEKIYDH-------LNIIGIVTQPDKPKGRGKKILPSPVKQFAINKGIT---VYQPEKLKGNIEFFNIIKDLKPDALIVASYGKIIPEDILNIPPYGGINVHASILPKYRGAAPIERALMNCEKETGVSIMKMEKGLDTGPVYAIKKIPILPDDDKGTLSIKLANLGADLLLEVLPLIKEG--KLIPVPQDESLASYAPK 203          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_LISMO (Methionyl-tRNA formyltransferase OS=Listeria monocytogenes GN=fmt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLA 765
            ++F+G+P+ SV VL  L        S ++V A+VTQP     R R + P PV + AL+   P   ++ PE+    + L  L AL+ +L +TAAYG ILP+  L  P  G +N+H SLLP YRG APV  AL DG  ETGV++ + V  LDAG +I++ K+ + D+     +   L   G+ELL+  LP  L G  ++ A P D  K T A
Sbjct:    4 IIFMGTPEFSVPVLTQLA-------STYDVVAVVTQPDRPVGRKRVLTPPPVKKAALELAIP---VYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSILGAELLMDTLPDFLAG--KITATPQDPEKVTFA 201          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_LISMH (Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=fmt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLA 765
            ++F+G+P+ SV VL  L        S ++V A+VTQP     R R + P PV + AL+   P   ++ PE+    + L  L AL+ +L +TAAYG ILP+  L  P  G +N+H SLLP YRG APV  AL DG  ETGV++ + V  LDAG +I++ K+ + D+     +   L   G+ELL+  LP  L G  ++ A P D  K T A
Sbjct:    4 IIFMGTPEFSVPVLTQLA-------STYDVVAVVTQPDRPVGRKRVLTPPPVKKAALELAIP---VYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLMDTLPDFLAG--KITAIPQDPEKVTFA 201          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_LISMF (Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=fmt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLA 765
            ++F+G+P+ SV VL  L        S ++V A+VTQP     R R + P PV + AL+   P   ++ PE+    + L  L AL+ +L +TAAYG ILP+  L  P  G +N+H SLLP YRG APV  AL DG  ETGV++ + V  LDAG +I++ K+ + D+     +   L   G+ELL+  LP  L G  ++ A P D  K T A
Sbjct:    4 IIFMGTPEFSVPVLTQLA-------STYDVVAVVTQPDRPVGRKRVLTPPPVKKAALELAIP---VYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLMDTLPDFLAG--KITAIPQDPEKVTFA 201          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_LISMC (Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=fmt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLA 765
            ++F+G+P+ SV VL  L        S ++V A+VTQP     R R + P PV + AL+   P   ++ PE+    + L  L AL+ +L +TAAYG ILP+  L  P  G +N+H SLLP YRG APV  AL DG  ETGV++ + V  LDAG +I++ K+ + D+     +   L   G+ELL+  LP  L G  ++ A P D  K T A
Sbjct:    4 IIFMGTPEFSVPVLTQLA-------STYDVVAVVTQPDRPVGRKRVLTPPPVKKAALELAIP---VYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLMDTLPDFLAG--KITAIPQDPEKVTFA 201          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_CARHZ (Methionyl-tRNA formyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=fmt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 80/211 (37.91%), Postives = 123/211 (58.29%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            +V++G+P+ +V  L  L        S  EVA +VT+P +   RG+KV+ SPV  +A +       + TP +  E+ +   + A++PE+ + AAYG +LP + LNIPP G +NIH SLLP YRGAAP++R L  G KETG+++ F    LD G +  +EK+ ++ +I   EL  +L   G++L+I  L  + +G   +   P D   AT AP
Sbjct:    3 IVYMGTPEFAVKPLAKLI-------SHHEVALVVTKPDAAAGRGKKVISSPVKLFAQENHLR---VITPLKFNEEVY-QEILAVKPEVIVVAAYGKLLPREILNIPPYGCLNIHASLLPFYRGAAPIERCLMAGEKETGITIMFMDEGLDTGDIALQEKVAINQEITGGELRKILAEIGADLIIEALKRLREGG--LPRVPQDHQLATYAP 200          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_MOOTA (Methionyl-tRNA formyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=fmt PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.579e-33
Identity = 85/211 (40.28%), Postives = 118/211 (55.92%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            LVF+G+P  +V  L  L  A        E AA++TQP   R RG+K+LP PV   AL  G P   +  P    +  FL +LR LQPEL +  A+G IL  + L++P  G VN+H SLLP YRGAAP+ RA+ +G  ETGV+  +    LDAG +I +EK+ +  +    E+   L   G+ LL+  L  I   ++R    P D++ AT AP
Sbjct:    3 LVFMGTPDFAVPSLQALVAAGH------EFAAVITQPDRPRGRGKKLLPPPVKSTALAAGLP---VRQPSDMKDREFLEDLRLLQPELIVVVAFGRILSREILDLPARGCVNLHASLLPRYRGAAPIHRAVMNGEVETGVTTMWMAPQLDAGDIILQEKLPIPPEATTGEIHDRLAEVGAGLLVHTLELI--AASRAPRLPQDEALATYAP 202          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_THEMA (Methionyl-tRNA formyltransferase OS=Thermotoga maritima GN=fmt PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.400e-33
Identity = 82/211 (38.86%), Postives = 120/211 (56.87%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            +VF+G+P+ +  +L+ L          F V  +VTQP   R RGRKV P+PV   A     P      PE   +   L  LR+++P++ I A+YG IL  K L++P +G  NIHPSLLP YRGA+P+QR L++G + TGV++   V+ LDAGP+  ++++ VD      +L   L     E+LI  L  +  G+  +K Q  D S+AT AP
Sbjct:    3 IVFVGTPEFAAEILEHLIKNG------FNVVGVVTQPDKPRGRGRKVAPTPVKAVAEKHEVP---FIQPESINKKEALEFLRSVRPDVIIVASYGKILGEKVLSLPRLGCYNIHPSLLPKYRGASPIQRVLENGEERTGVTIYKMVKELDAGPIALQKEISVDPFETFDQLEKRLIELSKEMLIEFLEKLKTGNIELKEQ--DHSRATYAP 202          
The following BLAST results are available for this feature:
BLAST of EY693125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FMT_BACLD1.616e-3539.34Methionyl-tRNA formyltransferase OS=Bacillus liche... [more]
FMT_DICTD3.599e-3538.50Methionyl-tRNA formyltransferase OS=Dictyoglomus t... [more]
FMT_DICT61.047e-3437.56Methionyl-tRNA formyltransferase OS=Dictyoglomus t... [more]
FMT_LISMO1.512e-3340.00Methionyl-tRNA formyltransferase OS=Listeria monoc... [more]
FMT_LISMH1.512e-3340.00Methionyl-tRNA formyltransferase OS=Listeria monoc... [more]
FMT_LISMF1.512e-3340.00Methionyl-tRNA formyltransferase OS=Listeria monoc... [more]
FMT_LISMC1.512e-3340.00Methionyl-tRNA formyltransferase OS=Listeria monoc... [more]
FMT_CARHZ1.512e-3337.91Methionyl-tRNA formyltransferase OS=Carboxydotherm... [more]
FMT_MOOTA2.579e-3340.28Methionyl-tRNA formyltransferase OS=Moorella therm... [more]
FMT_THEMA4.400e-3338.86Methionyl-tRNA formyltransferase OS=Thermotoga mar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-A11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693125 ID=EY693125; Name=EY693125; organism=Citrus sinensis; type=EST; length=950bp
CCACGCGTCCGCGTTGAAGACGAAAAGACAAAAGAAATGAATTCTTCGTT
GATGATAAGACGTTTCTTCTGCTTCAAAGGCCCGGCAACATCATCAACAA
CACCTTCCGCTTTTTCTGTTTCGAGGAAAAAGCCCCTCGTCTTCTTGGGC
TCTCCTCAGGTGTCTGTCAATGTTCTTGACACTCTGTTCAACGCTTCTTC
CTCACCCGATTCCATTTTCGAGGTTGCAGCAATAGTTACTCAGCCTCCTT
CTAGAAGAGATAGAGGTAGAAAGGTGTTGCCTTCTCCAGTAGCGCAGTAT
GCTCTTGACAGAGGCTTTCCTGCTGACCTCATCTTCACGCCTGAAAGGGC
TGGTGAGGATGCTTTCTTGTCCAATTTAAGAGCTCTGCAGCCCGAACTTT
GCATTACAGCAGCTTATGGGAATATTTTACCAAGCAAATTCCTCAATATT
CCACCAATGGGTACTGTTAATATACACCCCAGTCTGCTGCCACTTTATCG
TGGTGCTGCTCCTGTTCAACGAGCATTGCAGGATGGAGCTAAAGAAACAG
GAGTATCACTGGCATTTTCCGTCCGAGCACTTGATGCTGGACCTGTCATT
GCCCGGGAGAAAATGGAAGTTGATGACCAAATTAAGGCACCAGAGTTACT
AGTATTGCTCTTTTCTGAAGGCTCTGAACTTCTTATACGTGAGCTTCCTT
CTATATTAGATGGGTCAGCTAGGGTGAAAGCACAACCTGCAGATGATTCT
AAAGCCACCTTGGCTCCAAGATAACTACTGANGAGTCATGGCTGTCCTTC
GATGAAGAAGNCTGCTGTCNTCATAATAAGGTCGGGGGCTTGCAGGGTGG
CAGAACCNAGCTAAAATGGCGGCGTGATGACAGAATGTCAGCAAGATCCG
AAACTAAGATATTACTACAGAGGTTGCCCACCATCGACCATGAGTAATGC
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