EY693116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693116 vs. ExPASy Swiss-Prot
Match: RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.283e-23 Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 120 RSADNSSYRDRRIDLGFGGVFTSDN*VRIYSSKIDYDGADSSKKLDHDRLPPFMKIFYVDSASMDAMYHRDTNEYIQHWLIAVVRRGIPKPVRIFRE 410 R+ D++SYRDRR D GFGG + + SSK D DG +S +KLD D L PF K FYV+S ++ AM + EY + I V + IPKPV+ FR+ Sbjct: 7 RTGDSTSYRDRRSDSGFGGTSSYGSSGSHTSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRD 103 HSP 2 Score: 51.2174 bits (121), Expect = 2.283e-23 Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 1 Query: 433 MPEMTEADFWATTSMQAHRWPMAMKRHELVGTAATRSGRILAELLAATVHDIAEPL 600 + E+ +A F T +Q+ WPMAMK +L+G A T SG+ L+ LL A VH A+P+ Sbjct: 111 LEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPM 166
BLAST of EY693116 vs. ExPASy Swiss-Prot
Match: RH20_ORYSJ (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica GN=Os01g0197200 PE=3 SV=2) HSP 1 Score: 56.9954 bits (136), Expect = 5.637e-17 Identity = 38/97 (39.18%), Postives = 50/97 (51.55%), Query Frame = 3 Query: 120 RSADNSSYRDRRIDLGFGGVFTSDN*VRIYSSKIDYDGADSSKKLDHDRLPPFMKIFYVDSASMDAMYHRDTNEYIQHWLIAVVRRGIPKPVRIFRE 410 R+AD SYRDRR + FGG R ++ D A ++ LD LP F K FYV+S S+ M + Y + I V R +PKPVR FR+ Sbjct: 7 RAADPGSYRDRRSEGAFGGG------TRAFAPTSKADSAAAAADLDG--LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95 HSP 2 Score: 51.9878 bits (123), Expect = 5.637e-17 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 1 Query: 433 MPEMTEADFWATTSMQAHRWPMAMKRHELVGTAATRSGRILAELLAATVHDIAEPL 600 + E+T+A F T +Q+ WPMA++ +L+G A T SG+ LA LL A VH A+P+ Sbjct: 103 LQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPI 158
BLAST of EY693116 vs. ExPASy Swiss-Prot
Match: RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2) HSP 1 Score: 48.9062 bits (115), Expect = 9.925e-11 Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 1 Query: 457 FWATTSMQAHRWPMAMKRHELVGTAATRSGRILAELLAATVHDIAEPLSG 606 F T +QA WPMA+K +L+G A T SG+ LA LL A VH A+P G Sbjct: 185 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLG 234 HSP 2 Score: 38.891 bits (89), Expect = 9.925e-11 Identity = 23/68 (33.82%), Postives = 36/68 (52.94%), Query Frame = 3 Query: 231 GADSSKKLDHDRLPP--------FMKIFYVDSASMDAMYHRDTNEYIQHWLIAVVRRGIPKPVRIFRE 410 G S ++LD LP F K FYV+S ++ AM +D Y I+V R +PKP+++F++ Sbjct: 102 GGSSKRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQD 169 The following BLAST results are available for this feature:
BLAST of EY693116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY693116 ID=EY693116; Name=EY693116; organism=Citrus sinensis; type=EST; length=942bpback to top |