EY693106

Overview
NameEY693106
Unique NameEY693106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693106 vs. ExPASy Swiss-Prot
Match: MND1_ARATH (Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana GN=MND1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.081e-42
Identity = 92/184 (50.00%), Postives = 109/184 (59.24%), Query Frame = 3
Query:  177 MSKKRGLSLEEKRGKILEIFYESQDFYXXXXXXXXXXXXXVITXXXXXXXXXXXXXXXXXXXXIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALXXXXXXXXXXXXXXXXXXXXXXXHIELKDEMGQYADNDPAAFESMKKCIEVAHAAANRWTXHIFTLQQWVSXHFP 728
            MSKKRGLSLEEKR K+L+IFYESQDF+             VI+                    IG S+YFWSLPSCAGNQLR+V +KLESDLQ S KR  ELV+QC AL                       H +LK+EM Q+ADNDPA  E+ +  IEVAH +ANRWT +IFTL+QW S +FP
Sbjct:    1 MSKKRGLSLEEKREKMLQIFYESQDFFLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVAKDKIGISIYFWSLPSCAGNQLRSVRQKLESDLQGSNKRLAELVDQCEALKKGREESEERTEALTQLKDIEKKHKDLKNEMVQFADNDPATLEAKRNAIEVAHQSANRWTDNIFTLRQWCSNNFP 184          
BLAST of EY693106 vs. ExPASy Swiss-Prot
Match: MND1_HUMAN (Meiotic nuclear division protein 1 homolog OS=Homo sapiens GN=MND1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15
Identity = 53/184 (28.80%), Postives = 78/184 (42.39%), Query Frame = 3
Query:  177 MSKKRGLSLEEKRGKILEIFYESQDFYXXXXXXXXXXXXXVITXXXXXXXXXXXXXXXXXXXX-IGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALXXXXXXXXXXXXXXXXXXXXXXXHIELKDEMGQYADNDPAAFESMKKCIEVAHAAANRWTXHIFTLQQWVSXHF 725
            MSKK+GLS EEKR +++EIF E++D +              IT                     IGTS Y+W+ PS A +  ++    LES L    ++H  L +                              +LK E+ +Y D DP   E +++  +VA  AANRWT +IF ++ W    F
Sbjct:    1 MSKKKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMVDCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEERTRLAKELSSLRDQREQLKAEVEKYKDCDPQVVEEIRQANKVAKEAANRWTDNIFAIKSWAKRKF 184          
BLAST of EY693106 vs. ExPASy Swiss-Prot
Match: MND1_BOVIN (Meiotic nuclear division protein 1 homolog OS=Bos taurus GN=MND1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15
Identity = 51/184 (27.72%), Postives = 78/184 (42.39%), Query Frame = 3
Query:  177 MSKKRGLSLEEKRGKILEIFYESQD-FYXXXXXXXXXXXXXVITXXXXXXXXXXXXXXXXXXXXIGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALXXXXXXXXXXXXXXXXXXXXXXXHIELKDEMGQYADNDPAAFESMKKCIEVAHAAANRWTXHIFTLQQWVSXHF 725
            MSKK+GLS EEKR +++EIFYE++D F              + T                    IGTS Y+W+ PS A +  +     L+S L    +++  L +                              +LK E+ +Y + DP   E +++  +VA  AANRWT +IF ++ W    F
Sbjct:    1 MSKKKGLSAEEKRTRMMEIFYETKDVFQLKDMEKIAPKEKGITTMSVKEVLQSLVDDGMVDCERIGTSNYYWAFPSKALHARKRKLEVLDSQLSEGNQKYANLQKSIEKAKVGRHETEERTMLAKELSSLRDQREQLKAEVEKYRECDPQVVEEIRQANQVAKEAANRWTDNIFAIKSWAKRKF 184          
BLAST of EY693106 vs. ExPASy Swiss-Prot
Match: MND1_MOUSE (Meiotic nuclear division protein 1 homolog OS=Mus musculus GN=Mnd1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.180e-14
Identity = 52/184 (28.26%), Postives = 78/184 (42.39%), Query Frame = 3
Query:  177 MSKKRGLSLEEKRGKILEIFYESQDFYXXXXXXXXXXXXXVITXXXXXXXXXXXXXXXXXXXX-IGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALXXXXXXXXXXXXXXXXXXXXXXXHIELKDEMGQYADNDPAAFESMKKCIEVAHAAANRWTXHIFTLQQWVSXHF 725
            MSKKRGLS EEKR +++EIF+E++D +              IT                     IGTS Y+W+ PS A +  +     L S L    ++H +L +                              +LK E+ +Y + DP   E +++  +VA  AANRWT +IF ++ W    F
Sbjct:    1 MSKKRGLSGEEKRTRMMEIFFETKDVFQLKDLEKLAPKEKGITAMSVKEVLQSLVDDGMVDCERIGTSNYYWAFPSKALHARKRKLEALNSQLSEGSQKHADLQKSIEKARVGRQETEERAMLAKELSSFRDQRQQLKAEVEKYRECDPQVVEEIREANKVAKEAANRWTDNIFAIKSWAKRKF 184          
BLAST of EY693106 vs. ExPASy Swiss-Prot
Match: MND1_XENLA (Meiotic nuclear division protein 1 homolog OS=Xenopus laevis GN=mnd1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.212e-12
Identity = 50/184 (27.17%), Postives = 77/184 (41.85%), Query Frame = 3
Query:  177 MSKKRGLSLEEKRGKILEIFYESQDFYXXXXXXXXXXXXXVITXXXXXXXXXXXXXXXXXXXX-IGTSVYFWSLPSCAGNQLRNVYRKLESDLQSSKKRHTELVEQCNALXXXXXXXXXXXXXXXXXXXXXXXHIELKDEMGQYADNDPAAFESMKKCIEVAHAAANRWTXHIFTLQQWVSXHF 725
            MSKKRGLS+EEKR +++EIF+E++D +              IT                     IGTS YFW+ PS A +  +     LE+     K++   L +  +                           EL  ++ +Y + DP   E +++  +VA  A NRWT +IF ++ W    F
Sbjct:    1 MSKKRGLSVEEKRTRMMEIFFETKDVFQLKDLEKIAPKEKGITSMSVKEILQSLVDDGMVDSERIGTSNYFWAFPSKALHARKRKLETLEAQFTEVKQKKESLQQCVDKAKVGRQDTEERSKLVEELASLRHRKEELCADLEKYKECDPDVVEEIRQSNKVAKDAVNRWTDNIFAVKSWAKKKF 184          
The following BLAST results are available for this feature:
BLAST of EY693106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
MND1_ARATH5.081e-4250.00Meiotic nuclear division protein 1 homolog OS=Arab... [more]
MND1_HUMAN6.915e-1528.80Meiotic nuclear division protein 1 homolog OS=Homo... [more]
MND1_BOVIN6.915e-1527.72Meiotic nuclear division protein 1 homolog OS=Bos ... [more]
MND1_MOUSE1.180e-1428.26Meiotic nuclear division protein 1 homolog OS=Mus ... [more]
MND1_XENLA3.212e-1227.17Meiotic nuclear division protein 1 homolog OS=Xeno... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-H03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693106 ID=EY693106; Name=EY693106; organism=Citrus sinensis; type=EST; length=940bp
CCACGCGTCCGAATTTCAAGTAATCAAGCGAAAATCCATTTCCCGCCTTA
GGCAGGGTACCATTATCTGGAATCTTCTCTCTCACTTCTCGATTCTCAGC
TCCGTTTCTGATTTTAAATTTAAAATACACAGATAGAGAAAGCCCGTAGC
TTGGGACAGGAATCGTTTCACTTGCTATGTCTAAGAAAAGGGGTCTTTCA
TTGGAAGAAAAGCGTGGCAAGATTCTTGAAATATTTTACGAGTCACAAGA
CTTCTACCTTCTTAAGGAGCTTGAGAAGTTGGGCCCCAAGAAAGGTGTAA
TTACCCAGTCTGTTAAAGATGTCGTCCAAAGTTTAGTGGATGATGATCTT
GTCTTAAAGGACAAGATTGGAACTTCTGTATACTTTTGGAGCCTACCTAG
CTGTGCTGGAAATCAGTTGCGGAATGTGTACCGAAAACTTGAATCTGATC
TGCAAAGTAGTAAAAAGCGGCACACAGAACTTGTTGAACAATGTAATGCA
TTAAAGAAGGGACGGGAAGAATCTGATGAACGAGAGGAGGCCTTAGAGGA
GCTGAAAGCTGTTGAACTGAAACATATCGAGTTGAAGGATGAGATGGGAC
AATATGCAGACAACGATCCTGCTGCCTTTGAAAGCATGAAAAAATGCATT
GAAGTTGCTCATGCAGCAGCAAACAGATGGACAGANCACATCTTCACACT
GCAACAGTGGGTGTCAAANCATTTCCCTCANGGCTAAGAGGGAGCTTTGA
CAATGTANCAGGGATGTGGTATACCAGAGATTTTGACTATTTAGAGTATC
ACCAGTCCACTGAGCTCCAGTGGTGATCAGACAGAAAAGGCTGTCCGNAN
ATGGCTTATCTTCCCTTGGATAGTAACCCAGTTGNNTCTGTGGACATCGG
TGTGACTCTATGAATATGCAAGGCATTTTTCTTCTAGTAA
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