EY693105

Overview
NameEY693105
Unique NameEY693105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY693105 vs. ExPASy Swiss-Prot
Match: YCV6_SCHPO (Putative hydrolase C777.06c OS=Schizosaccharomyces pombe GN=SPCC777.06c PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.633e-21
Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 3 
Query:  396 SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEP-GNKNRRLNTSILIRYPGPSGRR--NILIDAGKFFYHSALRWFPAYGIRNIDA 653
            S+++FMGTG S GIP V CLT     C  C  ++ P G KN R NTS+L++    SG R  NILID GK FY SAL+ F  + IR +DA
Sbjct:    6 SKLLFMGTGCSSGIPNVCCLTLEKPTCRTCLASLTPEGRKNNRFNTSVLLQVDDGSGDRPKNILIDCGKHFYVSALKHFVEHKIRYLDA 94

HSP 2 Score: 41.5874 bits (96), Expect = 2.633e-21
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 2 
Query:  653 VIITHSHADAIGGLDDLRDWT 715
            VI+TH HADAI G+DDLR+WT
Sbjct:   95 VILTHDHADAINGMDDLREWT 115
The following BLAST results are available for this feature:
BLAST of EY693105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCV6_SCHPO2.633e-2150.56Putative hydrolase C777.06c OS=Schizosaccharomyces... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-H02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693105 ID=EY693105; Name=EY693105; organism=Citrus sinensis; type=EST; length=937bp
CCACGCGTCCGCCCATCTCGGAAATCGGGTCAGCGTTGTCGCCGCTCGTT
TTCCAGAGTCTCCCGAGTTCTTCACTTTCCTCAAAATGCCCTTTCAGAAC
CCTAAAAAAGCCGAAAAAGTTCAAAAAGTAAAAAGTTATGAGACAATTTT
TTAAAAAAATCTGAAAAAAGAAGAAAAATTAGAACTTTCTGTCAATGGCA
TCATTTTTAGGCACGGTGAGGCCAAGCCCATCCTCAGTGTCCTGTTTTGC
TCCTTGCAGACGCCAAATATCGGTTTACACCTCTCAAATTTCACTCCCAA
CATCTGGGTTCTTTCCTTTCAAGAGGATTCTTCAAGCTTGCCTTCAATCT
AATTTGGCAAATGGGGATAATGGAGTGCAGTTACCTGCTCAGCAATCTGA
AATTGTATTTATGGGGACAGGAACTAGTGAAGGGATTCCTCGTGTCAGCT
GTCTAACTAATCCTTCAAAAAAATGCCCGGTGTGCACAAAAGCTGTCGAA
CCTGGTAATAAAAATAGGAGACTCAACACAAGTATCCTTATTCGTTATCC
TGGGCCATCTGGAAGGAGAAACATTTTAATAGATGCTGGCAAGTTTTTCT
ACCATAGCGCTCTTCGTTGGTTTCCTGCCTATGGGATAAGAAACATTGAT
GCGTTATAATTACTCATTCTCATGCTGATGCAATTGGAGGGTTGGATGAT
CTTCGAGACTGGACGACAATGTACAGCGTCACATTCCATTTACGNTGCAA
TGCGTGATTTTGAGGTATGAAGAGACTCNTTTATATTAGTGGATACAGCG
GGATATACCTGTGCTGCAGTTCAGAGCTGCATTTTATATATTGATGAGGA
GCATCCCTGTACAGATAAAGATACACCTTNACCAGGGGGATGGGGTGGTA
CCGGTCCCTGAATTCGTTTGGAAAATTGTTCATCAGG
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