EY693104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_YEAST (Large subunit GTPase 1 OS=Saccharomyces cerevisiae GN=LSG1 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.169e-41 Identity = 106/259 (40.93%), Postives = 148/259 (57.14%), Query Frame = 3 Query: 15 DDDERQAFLAWRRSLARLEE-NEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLE-GKAVSDTWRTQDTQQNID---DPETKVYSREELLARLQYEAEEIVKMRRQAGCSSTGKSNVQSVDESFAGNVAPKNVIVGFVGYPNVXKKLTXHALVGQKRTGVTSTPGKPS-ISNIDISENWSSVTVLAWCPILL 773 D E++AFL WRR LA L+E NE L+LTPFE+N+++W+QLWRV+ERSDL+V +VDAR+PL +R DLE Y +E D K LLLVNKADLL R WAKYF +I F F+ LE K + + +R QD ++ D + KV + ++L+ Q E + K+ + + G P + +G VGYPNV K T ++LVG K+ V+STPGK I +S++ +L CP L+ Sbjct: 152 DRQEKEAFLEWRRKLAHLQESNEDLLLTPFERNIEVWKQLWRVVERSDLVVQIVDARNPLLFRSVDLERYVKESDDRKANLLLVNKADLLTKKQRIAWAKYFISKNISFTFYSALRANQLLEKQKEMGEDYREQDFEEADKEGFDADEKVMEKVKILSIDQLEELFL------------SKAPNEPLLPPLPGQ--PPLINIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKTKHFQTIKLSDS----VMLCDCPGLV 392
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_DROME (Large subunit GTPase 1 homolog OS=Drosophila melanogaster GN=ns3 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.868e-40 Identity = 85/239 (35.56%), Postives = 138/239 (57.74%), Query Frame = 3 Query: 24 ERQAFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLEGKA---VSDTWRTQDTQQNIDDPETKVYSREELLARLQYEAEEIVKMRRQAGCSSTGKSN----------VQSVDESFAG-NVAPKNVIVGFVGYPNVXKKLTXHALVGQKRTGVTSTPGK 698 E +AFL WRR LA L+E+E++++TP+EKNL+ WRQLWRV+ERSD++V +VDAR+PL +R DLE Y +E++ K ++LVNK+DLL R+ WA+YF I F+ L+ +A + Q ++ +++ + + S E+ L ++ + + I + + G N ++ + + G ++V VG VGYPNV K T ++L+ K+ V++TPGK Sbjct: 133 ENEAFLDWRRDLALLQEDEEILMTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYSATLVEEELKREAEECLDSFPEVQQLRRAVEEIKQSLDSVEDALNVIEQKYKTIPETQNDELPRLPGDKNSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTINSLMTVKKVSVSATPGK 371 HSP 2 Score: 32.7278 bits (73), Expect = 1.868e-40 Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = 2 Query: 689 PRKTKHFQH*YL*K-LVLCDCPGLV 760 P KTK FQ +L K ++LCDCPGLV Sbjct: 369 PGKTKRFQTLFLDKDILLCDCPGLV 393
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_DANRE (Large subunit GTPase 1 homolog OS=Danio rerio GN=lsg1 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.702e-40 Identity = 99/269 (36.80%), Postives = 136/269 (50.56%), Query Frame = 3 Query: 24 ERQAFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLEGKAVSDTWRTQDTQQNIDD-----------PETKVYSREELLARLQYEAEEIVKMR------------RQAGCSSTGKSNVQSVDESF---AGNVAPKN-------------------VIVGFVGYPNVXKKLTXHALVGQKRTGVTSTPG 695 E+ +FL WRR LARLEE +KL+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RCPDLE Y +E+ +K +LL+NKADLL R+ WA+YF+ I VFW LE + + Q+ Q + ++ E EE Q E EE R ++G + N +S S + + KN + VG VGYPNV K T + + K+ V++TPG Sbjct: 133 EKDSFLTWRRDLARLEEEQKLILTPFERNLDFWRQLWRVIERSDVVVQIVDARNPLLFRCPDLEKYVKEVSVHKVNMLLLNKADLLTREQRRAWARYFQKEGIRAVFWSALAEAQRLEAEERGEDAMDQEDQSDTEEETASKNATDHHEENSSSPNEEKDENEQDEEEEGEDERICVDESEWQTCSEESGDEDHAEENPESTATSSFYNSSRLLRKNELLEMFKSVHSGPTCKDGQITVGLVGYPNVGKSSTINTIFRNKKVSVSATPG 401
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_MOUSE (Large subunit GTPase 1 homolog OS=Mus musculus GN=Lsg1 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.752e-39 Identity = 98/274 (35.77%), Postives = 138/274 (50.36%), Query Frame = 3 Query: 24 ERQAFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLEG-------KAVSDTWRTQDTQQNIDD---PETKVYSREELLAR----LQYE-------------AEEIVKMRRQAGCSSTGKS-------NVQSVDESF----------------AGNVAPKNVIVGFVGYPNVXKKLTXHALVGQKRTGVTSTPG 695 E+ FL WRR L RLEE +KL+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y +EID K ++L+NKADLL R WA +F+ + +FW L G DT +T+ ++D P + S E A +YE +EE + GC++ ++ N Q ++S+ V + VG VGYPNV K T + ++G K+ V++TPG Sbjct: 132 EKDNFLKWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRFAWAVHFEKEGVKVIFWSALAETDHLNGDLKEEVDSVAGDTNKTESESSSLDANEIPHRDLISLSEESASDSGDSKYEDCQEDEEEDWQTCSEEDSVPEEEEGCNADSETQNRKNAENQQVNNDSYLVSKQELLELFKKLHTGKKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPG 405
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_SCHPO (Large subunit GTPase 1 OS=Schizosaccharomyces pombe GN=lsg1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.693e-39 Identity = 98/256 (38.28%), Postives = 145/256 (56.64%), Query Frame = 3 Query: 15 DDDERQAFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLEGKAVSDTWRTQDTQQNIDDPETKVYSREELLARLQYEAEEIVKMRRQAGCSSTGKSNVQSVDESFAGNV--APKNVIVGFVGYPNVXKKLTXHALVGQKRTGVTSTPGKPS-ISNIDISENWSSVTVLAWCPILL 773 D ER++FL WRR+LA+L++ E ++TPFE+NL++WRQLWRV+ERSD++V +VDAR+PLF+R LE Y +E+ K+ LLVNKAD+L R W+ YF +++I F+F+ S + ++ D + S E+ LQ + ++ R +T K ++ + E FA + + G VGYPNV K T +ALVG K+ V+STPGK I++SE S L CP L+ Sbjct: 126 DRMERESFLNWRRNLAQLQDVEGFIVTPFERNLEIWRQLWRVIERSDVVVQIVDARNPLFFRSAHLEQYVKEVGPSKKNFLLVNKADMLTEEQRNYWSSYFNENNIPFLFF--------------SARMAAEANERGEDLETYESTSSNEIPESLQADENDVHSSR-----IATLKV-LEGIFEKFASTLPDGKTKMTFGLVGYPNVGKSSTINALVGSKKVSVSSTPGKTKHFQTINLSEKVS----LLDCPGLV 357
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_HUMAN (Large subunit GTPase 1 homolog OS=Homo sapiens GN=LSG1 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.175e-35 Identity = 69/134 (51.49%), Postives = 89/134 (66.42%), Query Frame = 3 Query: 24 ERQAFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLEGKAVSDTWRTQDTQQN 425 E+ FL WRR L RLEE +KL+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y +E+D K ++L+NKADLL R WA YF+ D+ +FW L G + + R D Q N Sbjct: 132 EKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFEKEDVKVIFWSALAGAIPLNGDSEEEANR-DDRQSN 264
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_MACFA (Large subunit GTPase 1 homolog OS=Macaca fascicularis GN=LSG1 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.004e-35 Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 24 ERQAFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLEGKAVSDTWRTQDTQQNIDDPETKVYSREEL 467 E+ FL WRR L RLEE +KL+LT FE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y +EID K ++L+NKADLL R WA YF+ D+ +FW L G + + D Q N + E + E+ Sbjct: 132 EKDNFLEWRRQLVRLEEEQKLILTSFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDASKENVILINKADLLTAEQRSAWATYFEKEDVKVIFWSALAGAIHLNGDSEEEA-NKDDRQSNTAEFEHSSFDEAEI 278
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_CHICK (Large subunit GTPase 1 homolog OS=Gallus gallus GN=LSG1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.697e-34 Identity = 68/147 (46.26%), Postives = 95/147 (64.63%), Query Frame = 3 Query: 24 ERQAFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLEGKAVSDTWRTQDTQQNIDDPETKVYSREE 464 ER++FL WRR LA LEE +KL+LTPFE+NL+ WRQLWRV+ERSD++V +VDAR+PL +RC DLE+Y +E+ K ++L+NKADLL R WA++F+ + VFW L G+ ++ D E + S+EE Sbjct: 123 ERESFLEWRRQLAHLEEEKKLILTPFERNLEFWRQLWRVIERSDIVVQIVDARNPLLFRCQDLESYVKEVSNDKENMILINKADLLSEEQRAAWAQFFEKEGVKVVFWSALAECRRLSGEV--KELDADSVADDLSDSEEESSSQEE 267
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_RAT (Large subunit GTPase 1 homolog OS=Rattus norvegicus GN=Lsg1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.100e-33 Identity = 64/119 (53.78%), Postives = 82/119 (68.91%), Query Frame = 3 Query: 24 ERQAFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLEG 380 E+ FL WRR L RLEE +KL+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y +EID K ++L+NKADLL R WA +F+ + +FW L G Sbjct: 132 EKDNFLKWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRVAWAVHFEKEGVKVIFWSALAETVHLNG 250
BLAST of EY693104 vs. ExPASy Swiss-Prot
Match: LSG1_BOVIN (Large subunit GTPase 1 homolog OS=Bos taurus GN=LSG1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.199e-33 Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 3 Query: 24 ERQAFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDKYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWXXXXXXXXLEGKAVSD 395 E+ FL WRR L LEE + L+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y + ID K ++L+NKADLL R WA++FK ++ +FW L G + D Sbjct: 132 EKDNFLEWRRQLVWLEEEQNLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKTIDDNKENVILINKADLLTAEQRSAWAEFFKKENVKVIFWSALAEAIKLMGNSKGD 255 The following BLAST results are available for this feature:
BLAST of EY693104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY693104 ID=EY693104; Name=EY693104; organism=Citrus sinensis; type=EST; length=920bpback to top |