EY693087

Overview
NameEY693087
Unique NameEY693087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_CHICK (DDB1- and CUL4-associated factor 13 OS=Gallus gallus GN=DCAF13 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.135e-44
Identity = 87/202 (43.07%), Postives = 119/202 (58.91%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNGPVATLXXXXXXXXXXXEPLARYVWXDSFWAXDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWG 752
            M+VKV+SR+ D++ RE   DLQRV  NYDP L P E A EYVRAL A KLE++FA+PF+ +LDGHRDG++CMAK+P  L    SG+ DG++R+W++  R+ +     H+G VRG+     G    + G D TVK W                  EP+   +    +   DH W+  +FAT G QVDIW+  R+ P+ S  WG
Sbjct:    1 MRVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFLSSLDGHRDGVNCMAKHPKSLSTVLSGACDGEVRIWNLTKRQCIRALQAHEGFVRGMCARFCGTSFFTVGDDKTVKQWK-------MESPGYGEEEEPIHTILGKTVYTGIDHHWKDAVFATCGQQVDIWDEQRTSPMCSLTWG 195          
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_PONAB (DDB1- and CUL4-associated factor 13 OS=Pongo abelii GN=DCAF13 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.203e-43
Identity = 88/204 (43.14%), Postives = 119/204 (58.33%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLW--NGPVATLXXXXXXXXXXXEPLARYVWXDSFWAXDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWG 752
            MKVK++SR+ D + RE   DLQRV  NYDP L P E   EYVRAL A KLE++FA+PF+ +LDGHRDG++C+AK+P  L    SG+ DG++R+W++  R  +     H+G VRG+     G    + G D TVK W  +GP               EPL   +    +   DH W+  +FAT G QVDIW+  R+ P+ S  WG
Sbjct:    1 MKVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPKNLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQWKMDGP---------GYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDEQRTNPVCSMTWG 195          
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_MOUSE (DDB1- and CUL4-associated factor 13 OS=Mus musculus GN=Dcaf13 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.203e-43
Identity = 86/204 (42.16%), Postives = 120/204 (58.82%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLW--NGPVATLXXXXXXXXXXXEPLARYVWXDSFWAXDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWG 752
            MKVK++SR+ D + RE   D+QRV  NYDP L P E   EYVRAL A KLE++FA+PF+ +LDGHRDG++C+AK+P  L    SG+ DG++++W++  R+ +     H+G VRG+     G    + G D TVK W  +GP               EPL   +    +   DH W+  +FAT G QVDIW+  R+ P+ S  WG
Sbjct:    1 MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFCGTSFFTVGDDKTVKQWKMDGP---------GYGEEEEPLYTVLGKTVYTGIDHHWKDPVFATCGQQVDIWDEQRTSPVCSMNWG 195          
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_HUMAN (DDB1- and CUL4-associated factor 13 OS=Homo sapiens GN=DCAF13 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 2.052e-43
Identity = 88/204 (43.14%), Postives = 119/204 (58.33%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLW--NGPVATLXXXXXXXXXXXEPLARYVWXDSFWAXDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWG 752
            MKVK++SR+ D + RE   DLQRV  NYDP L P E   EY+RAL A KLE++FA+PF+ +LDGHRDG++C+AK+P  L    SG+ DG++R+W++  R  +     H+G VRG+     G    + G D TVK W  +GP               EPL   +    +   DH W+  +FAT G QVDIW+  R+ PI S  WG
Sbjct:    1 MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQWKMDGP---------GYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDEQRTNPICSMTWG 195          
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_DICDI (DDB1- and CUL4-associated factor 13 OS=Dictyostelium discoideum GN=wdsof1 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.501e-43
Identity = 88/203 (43.35%), Postives = 123/203 (60.59%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNGPVATLXXXXXXXXXXXEPLARYVWXDSFWAXDHQWEGDLFATAG-AQVDIWNHNRSQPINSFQWG 752
            MK+KVISRS +E T+E++ D+++++ N DPNL P E+  EYVRAL A KL+++FA+PFIG+L GH DGI  M ++P  L    SGS DG I+LW++ +         H G VRGL  + DG+ +VSCG D T+K+W                  E ++ Y   ++F + DHQ     FAT+G   V+IW H RS PI + QWG
Sbjct:    1 MKIKVISRSEEEETKEKASDVRKLHRNLDPNLHPFERPREYVRALNATKLDRVFAKPFIGSLSGHTDGIFTMTRHPTLLNNVASGSCDGVIKLWNLTSLTERTTVQAHNGFVRGLVFTPDGKHMVSCGEDKTIKMWK-------LDLPEYTFNQEVISIYNGKNAFTSIDHQLNSTTFATSGPTSVEIWKHQRSTPIQTLQWG 196          
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_XENTR (DDB1- and CUL4-associated factor 13 OS=Xenopus tropicalis GN=dcaf13 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.737e-42
Identity = 87/202 (43.07%), Postives = 115/202 (56.93%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNGPVATLXXXXXXXXXXXEPLARYVWXDSFWAXDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWG 752
            MKVKV+ R+ D++ RE  +DLQRV  NYDP L P E   EY RAL A KLE++FA+PFI +LDGHRDG++C+AK+P  L    SG+ DG++++W++  R        H G VRGL V   G    + G D TVK W+                 EP+   +    F   DH     +FAT G QVDIW+  RS P+ S+ WG
Sbjct:    1 MKVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFIASLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTSFFTVGDDKTVKQWS-------MESPGYGEKVEPIRTILGKTVFTGIDHHMNDAIFATCGQQVDIWDEQRSAPMRSYAWG 195          
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_XENLA (DDB1- and CUL4-associated factor 13 OS=Xenopus laevis GN=dcaf13 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.963e-42
Identity = 87/202 (43.07%), Postives = 116/202 (57.43%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNGPVATLXXXXXXXXXXXEPLARYVWXDSFWAXDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWG 752
            MKVKV+ R+ D++ RE  +DLQRV  NYDP L P E + EY RAL A KLE++FA+PFI +LDGHRDG++C+AK+P  L    SG+ DG++++W++  R        H G VRGL V   G    + G D TVK W                  EP+   +    F   DH  +  +FAT G QVDIW+  RS P+ S+ WG
Sbjct:    1 MKVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVSREYTRALNATKLERVFAKPFIASLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTSFFTVGDDKTVKQW-------AMESPGYGEKVEPMRTILGKTVFTGIDHHVKDAVFATCGQQVDIWDEQRSAPMRSYAWG 195          
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_DANRE (DDB1- and CUL4-associated factor 13 OS=Danio rerio GN=dcaf13 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.832e-39
Identity = 81/202 (40.10%), Postives = 110/202 (54.46%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNGPVATLXXXXXXXXXXXEPLARYVWXDSFWAXDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWG 752
            MKVKV+ R+ D++ RE ++D+QRV  NYDP L P E   EY RAL A KLE++FA+PF+ +LDGHRD ISC+ K+   L    SG+ DG++++W++  R        H+G VRG+     G    + G D T+K WN                 EP+   +    F   DH      F T G  VDIW+  RS P+ SF WG
Sbjct:    1 MKVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVASLDGHRDVISCITKHAKSLSTVISGACDGEVKVWNLPKRECTRTVQAHEGFVRGICSRFCGTSFFTVGDDKTIKQWN-------MEAPGYGVREEPINTILGKAVFTGIDHHQREGTFVTCGQTVDIWDEQRSSPVLSFSWG 195          
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_YEAST (Protein SOF1 OS=Saccharomyces cerevisiae GN=SOF1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.888e-30
Identity = 76/218 (34.86%), Postives = 111/218 (50.92%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALD-GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVS-----------TDGRILVSCGTDCTVKLWNGPV---ATLXXXXXXXXXXXEPLAR-YVWXDSFWAXDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWG 752
            MK+K I RS D++   +S    ++  N +P L P E+A EY +AL A KLE++FA+PF+G L  GHRDG+  +AKN   L    +GS DG I+ W+++ R     +  H G V GL V+                ++SC  D TVKLW+  V   +             E L R +    +F   D   E   FAT GA++ +W+ NR +P++   WG
Sbjct:    1 MKIKTIKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKLERMFAKPFVGQLGYGHRDGVYAIAKNYGSLNKLATGSADGVIKYWNMSTREEFVSFKAHYGLVTGLCVTQPRFHDKKPDLKSQNFMLSCSDDKTVKLWSINVDDYSNKNSSDNDSVTNEEGLIRTFDGESAFQGIDSHRENSTFATGGAKIHLWDVNRLKPVSDLSWG 218          
BLAST of EY693087 vs. ExPASy Swiss-Prot
Match: DCA13_SCHPO (Protein sof1 OS=Schizosaccharomyces pombe GN=sof1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.371e-29
Identity = 79/203 (38.92%), Postives = 107/203 (52.71%), Query Frame = 3
Query:  147 MKVKVISRSTDEFTRERSQDLQRVYHNYDPNLRPQEKAVEYVRALTAAKLEKIFARPFIGALD-GHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNGPVATLXXXXXXXXXXXEPLARYVWXDSFWAXDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWG 752
            MKVK I+R T   TR   QD   V  N DP+L P E+A EY RAL A K++++FA PF+G L  GH+DG+  +A++   L    SGS DG ++LWD + R        H+G VRGL  S  G +L SC +D  V + N                 +    Y+   S    D    GDLFAT+G  V IW+++R  P+  F+WG
Sbjct:    1 MKVKTITRGTS-LTRLNDQD--PVKRNLDPSLHPFERAREYTRALNATKMDRMFAAPFLGQLGRGHQDGVYSLARDTKTLIDCASGSGDGAVKLWDASERCERWTSKAHEGIVRGLVFSNQGDVL-SCASDRYVYMLN-------------KQDGKVKRSYLGDSSLLDIDTSKGGDLFATSGENVSIWDYSRDTPVTKFEWG 186          
The following BLAST results are available for this feature:
BLAST of EY693087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
DCA13_CHICK4.135e-4443.07DDB1- and CUL4-associated factor 13 OS=Gallus gall... [more]
DCA13_PONAB1.203e-4343.14DDB1- and CUL4-associated factor 13 OS=Pongo abeli... [more]
DCA13_MOUSE1.203e-4342.16DDB1- and CUL4-associated factor 13 OS=Mus musculu... [more]
DCA13_HUMAN2.052e-4343.14DDB1- and CUL4-associated factor 13 OS=Homo sapien... [more]
DCA13_DICDI3.501e-4343.35DDB1- and CUL4-associated factor 13 OS=Dictyosteli... [more]
DCA13_XENTR1.737e-4243.07DDB1- and CUL4-associated factor 13 OS=Xenopus tro... [more]
DCA13_XENLA2.963e-4243.07DDB1- and CUL4-associated factor 13 OS=Xenopus lae... [more]
DCA13_DANRE6.832e-3940.10DDB1- and CUL4-associated factor 13 OS=Danio rerio... [more]
DCA13_YEAST9.888e-3034.86Protein SOF1 OS=Saccharomyces cerevisiae GN=SOF1 P... [more]
DCA13_SCHPO8.371e-2938.92Protein sof1 OS=Schizosaccharomyces pombe GN=sof1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-F05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693087 ID=EY693087; Name=EY693087; organism=Citrus sinensis; type=EST; length=935bp
CCACGCGTCCGTAGATTAGTTTTACTCTTACATACTCTCTGTCCAACGGT
CACTCACTGTATCATCGTCTGTCTAATTATATACCGAATAGTACACAAAT
TTGAGGATTAAATAGACAATTAAACCCTAATAATTGAGAAGCAAATATGA
AGGTAAAAGTAATATCTCGTTCCACCGATGAATTCACTCGAGAACGAAGC
CAGGACCTCCAGAGGGTTTATCATAATTACGATCCGAATCTTCGACCGCA
AGAGAAGGCCGTGGAGTATGTCAGGGCTCTTACTGCAGCCAAATTGGAGA
AGATTTTTGCAAGGCCGTTTATTGGAGCACTGGATGGTCACAGAGATGGA
ATATCTTGTATGGCAAAGAACCCCAATTATTTGAAAGGATTTTTTTCTGG
TTCTATGGATGGAGATATTCGTCTTTGGGATATTGCTAACAGGAGAACAG
TTTGTCAGTACTCTGGTCACCAAGGTGCTGTACGAGGTTTGACAGTTTCA
ACAGATGGACGCATTTTGGTATCATGTGGAACTGATTGCACTGTCAAGCT
CTGGAATGGTCCTGTTGCTACTCTTACTGATTCAGATGACTCAACTGATA
ATTCATCTGAGCCTCTGGCCCGTTATGTTTGGAANGATTCATTCTGGGCT
GNTGATCACCAATGGGAAGGTGATCTGTTTGCCACAGCTGGTGCTCAAGT
TGATATATGGAATCACAATAGGTCTCAGCCTATCAACAGCTTTCAGTGGG
GACAGATACAGTATATCTGTTAGATTTAATCGGGAGGATCAATGGCTTAA
CACANCAGCTAGTGATCGAGCTCCCCTATTATGATGCGCATGTCTCCCCC
GCAAGGAAGGTTTTTGAGACAAAATCCATTCTTTTCTTGGACCCATGGAG
CTATGAATTTTACGGCAAAGGGGATGCCATGTTAT
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