EY693032

Overview
NameEY693032
Unique NameEY693032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.193e-17
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1
Query:  508 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            MALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLS     +   PA+CT+      +  D ++ S++       + I +TCGTT
Sbjct:    3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTT 90          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.568e-16
Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 1
Query:  508 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            MAL  SAIGFEGYEKRLE+SFFE G+F+DP GRGLR+LS     K   PA+CT+      N  D ++ S++     P + I +TCGTT
Sbjct:    1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTT 88          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.493e-16
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  511 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            ALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLS     +   PA+CT+      +  D ++ S++       + I +TCGTT
Sbjct:    4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTT 90          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.959e-16
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 1
Query:  508 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            MAL  SAIGFEGYE RLE+SFFE G+F+DP GRGLR+LS     K   PA+CT+      N  D ++ S++     P + I +TCGTT
Sbjct:    1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTT 88          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 1
Query:  505 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            +M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSLS     +   PA+CT+      +  D ++ S++       + I +TCGTT
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTT 90          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.264e-15
Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = 1
Query:  505 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            +M LPVSAIGFEG+EKRLE+SF EPG+F+DP G+GLRSLS     +   PA+CT+      +  D ++ S++       + I +TCGTT
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTT 90          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.957e-15
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1
Query:  508 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSL+     +   PA+CT+      +  D ++ S++       + I +TCGTT
Sbjct:    1 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTT 88          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.045e-15
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 1
Query:  508 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            MALP SAIGFEGYEKRLE+SFFE   FADP G+GLR+L+     +   PA+CT+         D ++ S++     P + I +TCGTT
Sbjct:    1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQYLDSYVLSESSLFVYPYKIIIKTCGTT 88          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.514e-14
Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 1
Query:  511 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            A PVSAIGFEGYEKRLE++F E  VF DP GRGLR+LS        + A+CT+        FD ++ S++     PL+ + +TCGTT
Sbjct:    9 ASPVSAIGFEGYEKRLEITFSEAPVFVDPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYPLKIVIKTCGTT 95          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.514e-14
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  514 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLF-LRCQMNIFDHMSSQNQPLCVPLQSIYQTCGTT 768
            + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LS  +  +   PA+CT+       ++  ++ S++       + I +TCGTT
Sbjct:   16 MTISAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAHLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTT 101          
The following BLAST results are available for this feature:
BLAST of EY693032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
DCAM_NICSY9.193e-1752.27S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_IPONI1.568e-1652.27S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_TOBAC3.493e-1651.72S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_IPOBA5.959e-1651.14S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_SOLTU1.016e-1549.44S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_DATST2.264e-1548.31S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_SOLCI2.957e-1548.86S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_CATRO5.045e-1548.86S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_MAIZE9.514e-1448.28S-adenosylmethionine decarboxylase proenzyme OS=Ze... [more]
DCAM2_DIACA9.514e-1444.19S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-A10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693032 ID=EY693032; Name=EY693032; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGAGGAGATCGAAATTCGTTTTGTGAAACAGAGTGAAAAAT
CAACCCTTCTTTAATCCTCAAGGAATTTTATTATTTTCTTGGTCTCTGAA
TCGAGGGTTTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTATATTATCT
GAGCAAGGCTGAATGATCTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCT
AGCAGTAGTTCCTTATTCTACGAAGCTCCTCTTGGTTACAGCATTGAAGA
CGTTCGACCTCACGGTGGCATAAAGAAGTTCAGATCAGCTGCATACTCAA
ACTGCGTCCGCAAACCATCCTGAGATCGTCCAATTTGTCCCATACCCCCC
CAAAAAAAAGCTCACTACTACTGCAATTTTAATTTTTTTTAGTTTTAGCC
GTCTTAATACTGCAATTTACTTGGCCTATTTCTTTTTCGACTTCCCTCGT
TCTCTCGTTCTGCCCTCTTTGCTCTTTGCAATTGTCATTTGTTTTCTGTA
AGGCAAGATGGCCTTGCCAGTCTCTGCAATTGGATTTGAAGGTTATGAAA
AGAGGCTTGAAGTTTCCTTTTTTGAGCCTGGTGTCTTTGCTGATCCTGGA
GGTAGGGGCCTCCGCTCTCTGTCAAACATCAATTGGATGAAATACTGAAA
CCCTGCGAAATGCACATTGTTTCTTCGTTGTCAAATGAACATCTTTGATC
ATATGTCCTCTCAGAATCAGCCTCTTTGTGTACCCTTACAAAGTATTTAT
CAAACTTGTGGGACTACCNAGCTGCTTCTTNNCATCCTGNCATNNCTCAG
TAGCTGAGTCCCCTCTCGTGTCTGTCGATCTGTGAGATACACTCTGGAAG
CTTCTATTTGCTGGGCTCAGCCATCCACACCGTACTCTCTGAGGAGAACT
GTC
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