EY693007

Overview
NameEY693007
Unique NameEY693007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.885e-35
Identity = 65/117 (55.56%), Postives = 75/117 (64.10%), Query Frame = 3
Query:  288 YDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEVMNISPALG*GSCA-------TQVTGE 617
            Y+KI   TCR+IG +SDD G  AD C  LV+I +  P IAQGV G FT+RPEDIGAGDQG+MF YAT ETPE +P    LA KLGA +TEV         G+CA       TQVT E
Sbjct:   67 YEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKN------GTCAWLRPDGKTQVTVE 177          

HSP 2 Score: 55.8398 bits (133), Expect = 2.885e-35
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 1
Query:  157 QISDAELDACLDQDAESKVACETCAITYMVVVFG 258
            Q+SDA LDACL QDA+SKVACETC  T MV+VFG
Sbjct:   24 QVSDAVLDACLAQDADSKVACETCTKTNMVMVFG 57          
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.520e-33
Identity = 56/91 (61.54%), Postives = 64/91 (70.33%), Query Frame = 3
Query:  288 YDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEV 560
            Y+KI   TCR+IG VSDD G  AD+C  LV I +  P IAQGV G  T+RPE+IGAGDQG MF YAT ETPE +P    LA KLGA +TEV
Sbjct:   65 YEKIARDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEV 155          

HSP 2 Score: 56.225 bits (134), Expect = 1.520e-33
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 1
Query:  157 QISDAELDACLDQDAESKVACETCAITYMVVVFG 258
            QISDA LDACL QDAESKVACETC  T +V+VFG
Sbjct:   22 QISDAVLDACLAQDAESKVACETCTKTNLVMVFG 55          
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.357e-33
Identity = 64/117 (54.70%), Postives = 71/117 (60.68%), Query Frame = 3
Query:  288 YDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEVMNISPALG*GSCA-------TQVTGE 617
            Y+KI   TCR IG VS D G  AD+C  LV I +  P IAQGV G  T+RPEDIGAGDQG MF YAT ETPE +P    LA KLGA +TEV         G+CA       TQVT E
Sbjct:   69 YEKIVADTCREIGFVSPDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKN------GTCAWLRPDGKTQVTVE 179          

HSP 2 Score: 56.225 bits (134), Expect = 3.357e-33
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 1
Query:  157 QISDAELDACLDQDAESKVACETCAITYMVVVFG 258
            QISDA LDACL QDAESKVACETC  T +V+VFG
Sbjct:   26 QISDAVLDACLAQDAESKVACETCTKTNLVMVFG 59          
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 7.417e-33
Identity = 63/117 (53.85%), Postives = 75/117 (64.10%), Query Frame = 3
Query:  288 YDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEVMNISPALG*GSCA-------TQVTGE 617
            Y+KI   TCR+IG +SDD G  AD C  LV+I +  P IAQGV G FT+RPE++GAGDQG+MF YAT ETPE +P    LA KLGA +TEV         G+CA       TQVT E
Sbjct:   67 YEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKN------GTCAWVRPDGKTQVTVE 177          

HSP 2 Score: 49.6766 bits (117), Expect = 7.417e-33
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 1
Query:  157 QISDAELDACLDQDAESKVACETCAITYMVVVFG 258
            Q+SDA LDACL QDA+SKVACET   T MV+V G
Sbjct:   24 QVSDAVLDACLAQDADSKVACETVTKTNMVMVLG 57          
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.258e-32
Identity = 55/91 (60.44%), Postives = 64/91 (70.33%), Query Frame = 3
Query:  288 YDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEV 560
            Y+KI   TCR+IG VSDD G  AD+C  LV+I +  P IAQGV G  T+RPE+IGAGDQG MF YAT ET E +P    LA KLGA +TEV
Sbjct:   65 YEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETSELMPLSHVLATKLGARLTEV 155          

HSP 2 Score: 55.8398 bits (133), Expect = 1.258e-32
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 1
Query:  157 QISDAELDACLDQDAESKVACETCAITYMVVVFG 258
            QISDA LDACL+QD +SKVACETC  T MV+VFG
Sbjct:   22 QISDAVLDACLEQDQDSKVACETCTKTNMVMVFG 55          
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.990e-32
Identity = 55/91 (60.44%), Postives = 62/91 (68.13%), Query Frame = 3
Query:  288 YDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEV 560
            Y+KI   TCR IG VS D G  AD+C  LV I +  P IAQGV G  T+RPE+IGAGDQG MF YAT ETPE +P    LA KLGA +TEV
Sbjct:   69 YEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEV 159          

HSP 2 Score: 54.299 bits (129), Expect = 7.990e-32
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 1
Query:  157 QISDAELDACLDQDAESKVACETCAITYMVVVFG 258
            QISDA LDACL QD ESKVACETC  T +V+VFG
Sbjct:   26 QISDAVLDACLAQDPESKVACETCTKTNLVMVFG 59          
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.902e-30
Identity = 63/117 (53.85%), Postives = 74/117 (63.25%), Query Frame = 3
Query:  288 YDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEVMNISPALG*GSCA-------TQVTGE 617
            Y+KI   TCR+IG VS D G  AD+C  LV+I +  P IAQGV G FT++PE+IGAGDQG MF YAT ETPE +P    LA KLGA +TEV         G+CA       TQVT E
Sbjct:   40 YEKIVRNTCRNIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKN------GTCAWLRPDGNTQVTVE 150          

HSP 2 Score: 46.2098 bits (108), Expect = 1.902e-30
Identity = 19/28 (67.86%), Postives = 25/28 (89.29%), Query Frame = 1
Query:  175 LDACLDQDAESKVACETCAITYMVVVFG 258
            +DACL+QD++SKVACETC  T +V+VFG
Sbjct:    3 VDACLEQDSDSKVACETCTKTNLVMVFG 30          
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 8.226e-28
Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 3
Query:  288 YDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEV 560
            Y+KI   TCR+IG VSDD G  AD+C  LV+I +  P IAQGV G  T+RPE+IGAGDQG MF YAT ETPE +P    LA KLGA +TEV
Sbjct:   32 YEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEV 122          

HSP 2 Score: 36.5798 bits (83), Expect = 8.226e-28
Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  193 QDAESKVACETCAITYMVVVFG 258
            QD +SKVACETC  T MV+VFG
Sbjct:    1 QDPDSKVACETCTKTNMVMVFG 22          
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.289e-26
Identity = 46/91 (50.55%), Postives = 54/91 (59.34%), Query Frame = 3
Query:  288 YDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEV 560
            Y+ I    C+ IG  S+D G  AD C  LV I    P I QGV G  T+  E+IGAGDQG MF YAT ETPE +P    LA +LG  +TEV
Sbjct:   68 YEAIVRKVCKEIGFTSEDVGLDADKCKVLVHIEEQSPDIGQGVHGMGTKALEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGYKLTEV 158          

HSP 2 Score: 55.0694 bits (131), Expect = 4.289e-26
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 1
Query:  157 QISDAELDACLDQDAESKVACETCAITYMVVVFG 258
            Q+SDA LDACL+QD +SKVACETC  T MV+VFG
Sbjct:   25 QVSDAVLDACLEQDPDSKVACETCCKTGMVMVFG 58          
BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.192e-25
Identity = 79/179 (44.13%), Postives = 100/179 (55.87%), Query Frame = 3
Query:  117 QSVSGGHPDKL--SLPNL*CGA*CL---P*SRC*EQGCLRDMRHYLHGRGLWIGLPSMPM*TYDKIGGYTCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEVMNISPALG*GSCA-------TQVTGE 617
            +SV+ GHPDKL   + +    A CL   P S+   + C +     + G      + +     Y+KI   TCR IG +SDD G  ADHC  LV+I +  P IAQGV G FT+RPE++GAGDQG+MF YAT ETPE +P    LA KLGA +TEV         G+CA       TQVT E
Sbjct:   11 ESVNEGHPDKLCDQVSDAVLDA-CLAQDPDSKVACETCTKTNMVMVFGE-----ITTKATVDYEKIVRDTCRDIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLTHMLATKLGARLTEVRKN------GTCAWLRPDGKTQVTIE 177          
The following BLAST results are available for this feature:
BLAST of EY693007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451
Match NameE-valueIdentityDescription
METK1_TRIMO2.885e-3555.56S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK_MESCR1.520e-3361.54S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK2_DIACA3.357e-3354.70S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK3_HORVU7.417e-3353.85S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK_CAMSI1.258e-3260.44S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK1_BETVU7.990e-3260.44S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK1_PEA1.902e-3053.85S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK3_ACTCH8.226e-2861.54S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK_CHLRE4.289e-2650.55S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK2_HORVU2.192e-2544.13S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693007 ID=EY693007; Name=EY693007; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGACCGCTTTGCTATTGAGGTCTGGTCTTAAGGCTGAATCT
GAGATCTGTGCCGAAACACTTGTGTGCCACACCTTGACAAGACGGAGACC
TCTCTATTGGCCTCTGCAATCTGTGAGCGGGGGTCACCCCGACAAGTTGA
GTCTACCAAATCTCTGATGCGGAGCTTGATGCCTGCCTTGATCAAGATGC
TGAGAGCAAGGTTGCCTGCGAGACATGCGCCATTACCTACATGGTCGTGG
TCTTTGGATAGGATTACCATCAATGCCGATGTAGACATATGATAAGATTG
GTGGCTACACTTGCCGCTCTATTGGAATTGTTTCTGATGATGGGGGTTTT
GTTGCCGATCACTGCCTAGGCCTGGTTGATATTGTGCGACACAGACCTCA
TATCGCCCAGGGTGTTGATGGTGACTTTACTGAGCGCCCTGAAGACATTG
GTGCTGGAGACCAGGGGCTTATGTTTGCTTATGCTACTGCTGAGACCCCT
GAGTTCCTGCCTTTTCGGCGCGGCCTTGCCATCAAACTTGGAGCTCACGT
CACTGAGGTCATGAATATATCACCTGCTCTTGGCTAAGGCTCCTGCGCGA
CCCAAGTCACTGGTGAGGCTACAATGCCAAGGGTGGCATATACCTGTTCG
TATTCTTACGGCCTATTTCATGCAGCATGCAGAGACTGTCCTAATGATGA
AATGCTGCTGACTCATGGATCACGTATAATGCTGCATCTCCGAAGCTTCG
TTGTTGGAAACCNTTCTCCACCTTATCCTCCCGTCNTTTTGCATTCGACG
GGCTCTTGGTGCCCTGGCTCCTTGACTTAAATCTCATCACCTTTGGGGGC
CGGG
back to top