EY693001

Overview
NameEY693001
Unique NameEY693001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_ARATH (Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.931e-79
Identity = 146/165 (88.48%), Postives = 147/165 (89.09%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.617e-79
Identity = 145/165 (87.88%), Postives = 146/165 (88.48%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA6_ARATH (Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.617e-79
Identity = 145/165 (87.88%), Postives = 146/165 (88.48%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA3_HORVU (Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.617e-79
Identity = 145/165 (87.88%), Postives = 146/165 (88.48%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.336e-79
Identity = 145/165 (87.88%), Postives = 146/165 (88.48%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTG YRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_GOSHI (Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.336e-79
Identity = 145/165 (87.88%), Postives = 146/165 (88.48%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTG YRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_DAUCA (Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.634e-78
Identity = 142/165 (86.06%), Postives = 147/165 (89.09%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECIS+HIGQAGIQ+GNACWELYCLEHGIQP+GQMPSDKTVGGGDDAFNTFFSETGAG HVPRA+FVDLEPTVIDE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.134e-78
Identity = 144/165 (87.27%), Postives = 145/165 (87.88%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTG YRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_ORYSJ (Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.788e-78
Identity = 144/165 (87.27%), Postives = 145/165 (87.88%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTG YRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_HORVU (Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.755e-78
Identity = 143/165 (86.67%), Postives = 145/165 (87.88%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTG YRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KL+DNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165
The following BLAST results are available for this feature:
BLAST of EY693001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
TBA2_ARATH1.931e-7988.48Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thali... [more]
TBA_PRUDU5.617e-7987.88Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 ... [more]
TBA6_ARATH5.617e-7987.88Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=T... [more]
TBA3_HORVU5.617e-7987.88Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 ... [more]
TBA4_GOSHI7.336e-7987.88Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 S... [more]
TBA2_GOSHI7.336e-7987.88Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 S... [more]
TBA_DAUCA1.634e-7886.06Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 S... [more]
TBA1_PEA2.134e-7887.27Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE... [more]
TBA2_ORYSJ2.788e-7887.27Tubulin alpha-2 chain OS=Oryza sativa subsp. japon... [more]
TBA2_HORVU4.755e-7886.67Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-G02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693001 ID=EY693001; Name=EY693001; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGAATTTCACTAGAAGGCGTCTTAATAAACGCCTTCGTTTA
GATTCAATTACTTTACGTCGCCGATTTTTCTTCTCTTAATCTGCGAAAAT
GAGAGAGTGCATTTCAATCCATATCGGTCAGGCCGGTATCCAGGTCGGAA
ATGCCTGCTGGGAACTCTACTGCCTCGAGCACGGCATTCAGCCTGATGGC
CAAATGCCCAGTGATAAGACAGTCGGAGGCGGCGACGATGCTTTCAACAC
CTTTTTCAGTGAAACTGGCGCAGGGAACCACGTGCCTCGTGCTGTCTTTG
TTGATCTTGAGCCCACTGTCATTGATGAAGAGAGGACCGGAACTTACCGC
CAGCTCTTCCACCCTGAGCAGCTCATCAGTGGCAAGGAATACGCTGCCAA
CAACTTCGCCCGTGGCCACTATACCATTGGTAAGGAGATTGCTGATCTCT
GCCTTGACCGCATCACGAAGCTGGCTGATAACTGCACTGTTCTCCAGGGA
TTCCTTGTTTTCAATGCTGCTGGTGGAGGAACTGCCTCTGATCTGGGTCT
CTTCTTCTGGACAGCTGTCTGTTGCTATGGAAAGAAAGCAAGTTGGCTAC
CTGACACCCAGCTCTCAGACTCCACTTCTGTGGTGAGCCTACAGAGTGTC
CTCTCACCCACTCGCTGTGAAGCATCTGATGAGGTCGTCTCCCCGACATG
ACGCCATGATAACATCGCAGGCCTCCTTGGATGGACGTCCTACTTACTAG
CCCAATAACTTGGTCCCAGTCATTCCTAATGACTGCCTACTGAAGATGAG
GCGCGTTAAAGGGTTGGACTGATTCCA
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