EY692977

Overview
NameEY692977
Unique NameEY692977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_DANRE (WD repeat-containing protein 55 OS=Danio rerio GN=wdr55 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 1.009e-39
Identity = 87/238 (36.55%), Postives = 135/238 (56.72%), Query Frame = 3
Query:   18 QIKSRQMEISLGSLPFGLDFHPSDQLVAAALITGDLHLYRYNADSPPQKLLDLHAHE-ESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGYLQIC*CIIKLDE 728
            +I+    +I L ++   + FHP   ++AA  I GD++L+ Y+      K L    H  +SCR V F + GQ + + S D++I   DVE G    R+  +H+  I +++ + E+  A+GDD+G +KVWD R+ T       HE+Y+SD+T       LL +SGDGTL V N+++   +  SE    +LTSV +MK GRKVVCGS  GT+ +++W  F   SDRF    +   CI+ + +
Sbjct:   24 KIRETPEDIKLEAIVNTIAFHPKQDILAAGDIDGDIYLFSYSCTEGENKELWSSGHHLKSCRKVLFSSDGQKLFSVSKDKAIHIMDVEAGKLETRIPKAHKVPINAMLLIDENIFATGDDEGTLKVWDMRKGTSFMDLKHHEDYISDITIDQAKRTLLTSSGDGTLGVFNIKRRRFELLSEIQNGDLTSVSIMKRGRKVVCGSGEGTIYIFNWNGFGATSDRFAVQAESVDCIVPITD 261          
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_ORYLA (WD repeat-containing protein 55 OS=Oryzias latipes GN=wdr55 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.116e-38
Identity = 85/238 (35.71%), Postives = 135/238 (56.72%), Query Frame = 3
Query:   18 QIKSRQMEISLGSLPFGLDFHPSDQLVAAALITGDLHLYRYNA-DSPPQKLLDLHAHEESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGYLQIC*CIIKLDE 728
            +I+    +I L ++   +  HPS  ++    + GD++ Y Y+  +   ++L     H +SCR VRF   G  + + S D+++   DVE G  ++R+  +H  AI SL+ V E+ +A+GDD+G +KVWD R+         H++Y+SD+        LL TSGDGT+ V N+++   +  SEF   +LTSV LMK G+KVVCGS  GTV +++W  F   SDRF    +   CI+ + +
Sbjct:   43 KIRETPEDIRLEAIANTVALHPSRDVLVCGDVDGDVYAYAYSCTEGETRELWSSGHHLKSCRQVRFSADGLKLYSVSRDKAVHQLDVERGQLVSRIRGAHAAAINSLLLVDENILATGDDRGTLKVWDMRKGEAFMDLKHHDDYISDIAVDQAKRILLTTSGDGTMGVFNIKRRRFELLSEFQSGDLTSVALMKRGKKVVCGSSEGTVYIFNWNGFGATSDRFAVKAESVDCIVPITD 280          
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_BOVIN (WD repeat-containing protein 55 OS=Bos taurus GN=WDR55 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.458e-38
Identity = 92/238 (38.66%), Postives = 131/238 (55.04%), Query Frame = 3
Query:   18 QIKSRQMEISLGSLPFGLDFHPSDQLVAAALITGDLHLYRYNADSPPQKLLDLHAHE-ESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGYLQIC*CIIKLDE 728
            +I+    +I L +   GL FHP+  L+AA  + GD+ ++ Y+      K L    H  +SCRAV F   GQ ++T S D++I   DVE G    R+  +H   I SL+ V E+ +A+GDD G I++WD R+         HEEY++DM    D   LL  SGDG L V N+++   +  SE    +LTSV LMK GRKV CGS  GT+ L++W  F   SDRF    +   C++ + E
Sbjct:   27 RIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVSKDKAIHFLDVELGRLERRISKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKEGPLMDMRQHEEYIADMALDPDKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVTLMKYGRKVACGSSEGTIYLFNWDGFGATSDRFALRAESIDCMVPVTE 264          
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_PONAB (WD repeat-containing protein 55 OS=Pongo abelii GN=WDR55 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.612e-37
Identity = 89/238 (37.39%), Postives = 130/238 (54.62%), Query Frame = 3
Query:   18 QIKSRQMEISLGSLPFGLDFHPSDQLVAAALITGDLHLYRYNADSPPQKLLDLHAHE-ESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGYLQIC*CIIKLDE 728
            +I+    +I L +   GL FHP+  L+AA  + GD+ ++ Y+      K L    H  ++CRAV F   GQ ++T S D++I   DVE G    R+  +H   I SL+ V E+ +A+GDD G I++WD R+         HEEY++DM        LL  SGDG L V N+++   +  SE    +LTSV LMK G+KV CGS  GT+ L++W  F   SDRF    +   C++ + E
Sbjct:   27 RIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLKACRAVAFSEDGQKLVTVSKDKAIHVLDVEQGRLERRISKAHGAPINSLLLVDENVLATGDDMGGIRLWDQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVTLMKCGKKVACGSSEGTIYLFNWNGFGATSDRFALRAESIDCMVPVTE 264          
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_RAT (WD repeat-containing protein 55 OS=Rattus norvegicus GN=Wdr55 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.105e-37
Identity = 89/238 (37.39%), Postives = 129/238 (54.20%), Query Frame = 3
Query:   18 QIKSRQMEISLGSLPFGLDFHPSDQLVAAALITGDLHLYRYNADSPPQKLLDLHAHE-ESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGYLQIC*CIIKLDE 728
            +I+    +I L +   GL FHP+  L+AA  + GD+ ++ Y+      K L    H  +SCRAV F   GQ ++T S D++I   DVE G    R+  +H   I SL+ V E+ + +GDD G I++WD R+         HEEY++DM        LL  SGDG L V N+++   +  SE    +LTSV LMK G+KV CGS  GT+ L++W  F   SDRF    +   C++ + E
Sbjct:   27 RIRDTPEDIVLEAPASGLAFHPTRDLLAAGDVDGDVFVFAYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVSKDKAIHVLDVEQGQLERRISKAHSAPINSLLLVDENVLVTGDDTGGIRLWDQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVALMKYGKKVACGSSEGTIYLFNWNGFGATSDRFALRAESIDCMVPVTE 264          
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_MOUSE (WD repeat-containing protein 55 OS=Mus musculus GN=Wdr55 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.749e-37
Identity = 89/238 (37.39%), Postives = 129/238 (54.20%), Query Frame = 3
Query:   18 QIKSRQMEISLGSLPFGLDFHPSDQLVAAALITGDLHLYRYNADSPPQKLLDLHAHE-ESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGYLQIC*CIIKLDE 728
            +I+    +I L +   GL FHP+  L+AA  + GD+ ++ Y+      K L    H  +SCRAV F   GQ ++T S D++I   DVE G    R+  +H   I S++ V E+ + +GDD G I++WD R+         HEEY++DM        LL  SGDG L V N+++   +  SE    +LTSV LMK G+KV CGS  GT+ L++W  F   SDRF    +   CI+ + E
Sbjct:   28 RIRDTPEDIVLEAPASGLAFHPTRDLLAAGDVDGDVFVFAYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVSKDKAIHILDVEQGQLERRISKAHSAPINSVLLVDENALVTGDDTGGIRLWDQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVALMKYGKKVACGSSEGTIYLFNWNGFGATSDRFALRAESIDCIVPVTE 265          
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_HUMAN (WD repeat-containing protein 55 OS=Homo sapiens GN=WDR55 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.590e-37
Identity = 88/238 (36.97%), Postives = 130/238 (54.62%), Query Frame = 3
Query:   18 QIKSRQMEISLGSLPFGLDFHPSDQLVAAALITGDLHLYRYNADSPPQKLLDLHAHE-ESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGYLQIC*CIIKLDE 728
            +I+    +I L +   GL FHP+  L+AA  + GD+ ++ Y+      K L    H  ++CRAV F   GQ ++T S D++I   DVE G    R+  +H   I SL+ V E+ +A+GDD G I++WD R+         HEEY++DM        LL  SGDG L + N+++   +  SE    +LTSV LMK G+KV CGS  GT+ L++W  F   SDRF    +   C++ + E
Sbjct:   27 RIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLKACRAVAFSEDGQKLITVSKDKAIHVLDVEQGQLERRVSKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGIFNIKRRRFELLSEPQSGDLTSVTLMKWGKKVACGSSEGTIYLFNWNGFGATSDRFALRAESIDCMVPVTE 264          
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_DICDI (WD repeat-containing protein 55 homolog OS=Dictyostelium discoideum GN=wdr55 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.771e-36
Identity = 80/229 (34.93%), Postives = 135/229 (58.95%), Query Frame = 3
Query:   39 EISLGSLPFGLDFHPSDQLVAAALITGDLHLYRYNADSPPQKLLDLHAHEESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGYLQIC*CIIKLD 725
            +IS  ++PF L+FHP++ L+  +   G L L++Y+ D    KL  L  H+  CR   F + G+ + T S+D S+   D+ TG+ +   E++H+  I  L++  E  V +GDD+G IKVWD RQ+ +   F  H +++SD+T   D   +  TSGDG +S+ N  + ++   SE S+ EL S + + NG+K+VCGSQ G++L+Y     ++   +F G+ Q    ++K++
Sbjct:   15 DISFNTIPFSLNFHPTEDLLVVSDAEGRLKLFKYSLDENEVKL-SLRPHQSGCRQANFSSDGKYIFTASSDCSMKVIDINTGSILYTREEAHDYPINCLVS-KEFMVFTGDDEGTIKVWDMRQQNIVCEFQEHGDFISDIT-TIDDRHIAATSGDGGVSIYNFVRKSMDDISEKSDNELLSCLSLDNGQKLVCGSQDGSILIYDRNNLENVK-KFAGHPQSVDALVKVN 239          
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_DROWI (WD repeat-containing protein 55 homolog OS=Drosophila willistoni GN=GK12179 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.012e-31
Identity = 78/223 (34.98%), Postives = 119/223 (53.36%), Query Frame = 3
Query:   24 KSRQMEISLGSLPFGLDFHPSDQLVAAALITGDLHLYRY-NADSPPQKLLDLHAHEESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 689
            +S   EI L      + FHP   ++A A I GD+HLY Y N ++   K +++HA  ++CR V F   G++++T S D+S++ TD+ET       E +H+DAI  L+ + E   ASGDD G +K+WD R +         E+ V+ M        LL TS DG L+  N+    +  +SE  EEEL  + + +   K+V G+  G +  Y+WGYF    D + G
Sbjct:  151 RSAPPEIKLEDFITDICFHPERHIIALATIIGDVHLYEYSNEENKLLKTIEVHA--KACRDVEFTEDGRSLITCSKDKSVMITDMETEKLKKLYETAHDDAINKLLVLDERLFASGDDSGTVKLWDFRTKDSIFELKEIEDQVTQMITNDQKKLLLATSADGYLTTFNIGARKLYVQSEPYEEELNCMGIYRGNSKLVVGTSKGRLYSYNWGYFGYHCDMYPG 371          
BLAST of EY692977 vs. ExPASy Swiss-Prot
Match: WDR55_DROSI (WD repeat-containing protein 55 homolog OS=Drosophila simulans GN=GD18783 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.254e-31
Identity = 77/223 (34.53%), Postives = 117/223 (52.47%), Query Frame = 3
Query:   24 KSRQMEISLGSLPFGLDFHPSDQLVAAALITGDLHLYRYNADSPPQKLL-DLHAHEESCRAVRFVNGGQAMLTGSTDRSILATDVETGATIARLEDSHEDAIYSLINVTESTVASGDDQGCIKVWDTRQRTLCNSFDAHEEYVSDMTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 689
            +S   EI L      + FHP   ++A A I GD+HLY Y  D+   KLL  +  H ++CR V F   G+ +LT S D+ ++ TD+ET       E +H+DAI +L  + E+  ASGDD G +K+WD R +         E+ ++ +T    +  LL TS DG L+  N+    +  +SE  EEEL  + + +   K+V G+  G +  Y+WG F    D + G
Sbjct:  147 RSSPPEIKLEDFITDICFHPDRDIIALATIIGDVHLYEY--DNEANKLLRTIEVHSKACRDVEFTEDGRFLLTCSKDKCVMVTDMETEKLKKLYETAHDDAINTLHVLNENLFASGDDAGTVKLWDLRTKNAIFELKELEDQITQLTTNEQSKLLLATSADGYLTTFNISARKMYVQSEPYEEELNCMGVYRGDSKLVVGTSKGRLYTYNWGQFGYHCDMYPG 367          
The following BLAST results are available for this feature:
BLAST of EY692977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
WDR55_DANRE1.009e-3936.55WD repeat-containing protein 55 OS=Danio rerio GN=... [more]
WDR55_ORYLA1.116e-3835.71WD repeat-containing protein 55 OS=Oryzias latipes... [more]
WDR55_BOVIN1.458e-3838.66WD repeat-containing protein 55 OS=Bos taurus GN=W... [more]
WDR55_PONAB1.612e-3737.39WD repeat-containing protein 55 OS=Pongo abelii GN... [more]
WDR55_RAT2.105e-3737.39WD repeat-containing protein 55 OS=Rattus norvegic... [more]
WDR55_MOUSE2.749e-3737.39WD repeat-containing protein 55 OS=Mus musculus GN... [more]
WDR55_HUMAN3.590e-3736.97WD repeat-containing protein 55 OS=Homo sapiens GN... [more]
WDR55_DICDI6.771e-3634.93WD repeat-containing protein 55 homolog OS=Dictyos... [more]
WDR55_DROWI1.012e-3134.98WD repeat-containing protein 55 homolog OS=Drosoph... [more]
WDR55_DROSI2.254e-3134.53WD repeat-containing protein 55 homolog OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-D12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692977 ID=EY692977; Name=EY692977; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGTAAATACAAATCAAGTCTCGGCAAATGGAGATAAGTTTA
GGAAGCTTACCGTTTGGTCTGGATTTTCATCCGTCGGATCAGCTCGTCGC
CGCCGCCCTCATCACGGGCGACCTTCATTTGTACCGTTACAATGCGGATT
CACCGCCCCAAAAGTTGCTGGATCTTCATGCTCACGAAGAGTCTTGTAGA
GCTGTTCGATTCGTCAACGGTGGACAAGCAATGCTGACGGGTTCAACTGA
CCGTTCAATTCTGGCCACGGATGTGGAGACTGGAGCCACTATTGCTCGTC
TTGAGGATTCTCATGAGGATGCTATTTATAGTTTGATCAACGTGACAGAG
TCAACTGTTGCCTCTGGCGATGATCAAGGCTGTATTAAGGTATGGGATAC
CAGACAACGTACTCTCTGCAATTCTTTTGACGCTCATGAGGAATATGTTT
CAGATATGACTTTTGCAGCTGATGCAATGAAACTGCTAGGAACAAGTGGA
GATGGGACTCTATCTGTTTGCAATCTTCGTAAAAATACAGTCCAAACTCG
GTCTGAGTTCTCTGAAGAAGAGCTAACATCAGTTGTTTTGATGAAGAATG
GTCGCAAAGTTGTATGTGGATCGCAGAGTGGAACTGTACTGTTGTATTCT
TGGGGATATTTCAAGGATTGCAGTGATCGTTTTGTTGGATATCTCCAAAT
CTGTTGATGCATTATTAAGCTTGATGAAGTANGGGTAATACTGGATCTGA
GAATGCCTCATTAGCCTGGTNGCATATTACCGACAGATCATTCAGCCATT
GCAGACACTCGAATATCCNATGAGAGCCTGCTTATCTCATGATAGAAGTT
CTGGCAGATATACATGATTCATGTGNACTCTGGGATTGACATATATAAAG
GGTCAG
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