EY692947

Overview
NameEY692947
Unique NameEY692947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692947 vs. ExPASy Swiss-Prot
Match: Y2446_ARATH (Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 3.349e-83
Identity = 139/176 (78.98%), Postives = 166/176 (94.32%), Query Frame = 2
Query:  143 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIXKSGINYTIIRPGGLRNDPP 670
            +VK KK+FVAGATG +GKRIVEQLL++GFAVKAGVRD++KAKT+  KD+PSLQIV+ADVTEG  KL+E IGDDS+AV+CATGF+PG+D+F PWKVDNFGTVNLV+ACRK+GV +F+L+SSILVNGAAMGQILNPAY+FLN+FGLTL+AKLQAE+YI KSGINYTI+RPGGL+NDPP
Sbjct:   43 AVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSF-KDDPSLQIVRADVTEGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKNDPP 217          

HSP 2 Score: 38.5058 bits (88), Expect = 3.349e-83
Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 1
Query:  664 PPTGNIIMETEILFMKVPFQRS-VAEVAVEHYFIPIILQS------VEIISRVDAPKR 816
            PPTGN++ME E    +    R  VAEVAVE      +LQ       VEI++R +APKR
Sbjct:  216 PPTGNVVMEPEDTLYEGSISRDLVAEVAVE-----ALLQEESSFKVVEIVARAEAPKR 268          
BLAST of EY692947 vs. ExPASy Swiss-Prot
Match: YHFK_BACSU (Uncharacterized sugar epimerase yhfK OS=Bacillus subtilis GN=yhfK PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 54/178 (30.34%), Postives = 84/178 (47.19%), Query Frame = 2
Query:  158 KIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILV-NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIXKSGINYTIIRPGGLRNDPPLETLS 685
            K+F+ GA G  G+R+V         +++A VR   K +   S +    + V A++ EGS +   A     +A++   G            VD  G    +EA    G+ RFI++S++   N     + L P Y+          AK  A++ +  SG+ YTIIRPGGLRN+P   T+S
Sbjct:    2 KVFLIGANGQIGQRLVSLFQDNPDHSIRAMVR---KEEQKASLEAAGAEAVLANL-EGSPEEIAAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALKPYYV----------AKHYADKILEASGLTYTIIRPGGLRNEPGTGTVS 165          
The following BLAST results are available for this feature:
BLAST of EY692947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y2446_ARATH3.349e-8378.98Uncharacterized protein At2g34460, chloroplastic O... [more]
YHFK_BACSU5.872e-1130.34Uncharacterized sugar epimerase yhfK OS=Bacillus s... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-B05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692947 ID=EY692947; Name=EY692947; organism=Citrus sinensis; type=EST; length=921bp
CTCTCAACTCTAACCAACCCCCTCTCCGCACTCTCACATTAACTAAGCAT
TTCTCCGTTTCCACCACCAAAACCTGGTCGCATTCAATCAACTCCACCAA
GATGGGAAAAAGTGAAATAACTGAGGAAGCAGAAGAAATGTAAGTGTGAA
GCAGAAGAAGATATTTGTGGCTGGAGCAACTGGCAGTTCCGGGAAAAGGA
TTGTTGAGCAGCTTCTAGCAAAGGGTTTTGCTGTCAAGGCCGGGGTTCGG
GATTTGGACAAGGCTAAAACTACTCTTTCCAAAGACAACCCATCTCTTCA
AATTGTGAAAGCAGATGTGACAGAGGGTTCTGCCAAACTATCAGAAGCTA
TAGGCGATGATTCAGAAGCTGTGGTGTGTGCCACAGGGTTTCAGCCTGGT
TGGGATTTGTTTGCTCCTTGGAAGGTTGATAATTTTGGCACAGTAAACCT
TGTTGAAGCATGCCGGAAAAGAGGCGTTAACAGATTCATTCTTATTAGCT
CCATTTTAGTCAATGGAGCTGCAATGGGGCAAATACTAAATCCAGCTTAC
ATTTTTCTGAATGTGTTTGGCCTCACCTTAATAGCAAAGCTTCAGGCAGA
GCAATACATCANGAAATCTGGTATTAACTACACGATCATAAGGCCTGGTG
GATTGAGAAATGACCCCCCACTGGAAACATTATCATGGAGACAGAGATAC
TCTTTATGAAGGTACCATTTCAGAGATCNGTCGCAGAAGTTGCTGTTGAG
CACTACTTCATCCCGATCATCTTACAAAGTGTGGAGATCATTTCTCGTGT
GGATGCTCCTAAGCGTCATATGAGGATCTTTTTGGNTCCATAAGCACGAT
GACTCANNTATCAAATAATATGCGGAGCTAGGGAATTTTATTTTATTATA
TTTTTTTTGGGTGGAACATCG
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