EY692887

Overview
NameEY692887
Unique NameEY692887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_SOYBN (40S ribosomal protein SA OS=Glycine max PE=2 SV=1)

HSP 1 Score: 407.142 bits (1045), Expect = 6.957e-113
Identity = 200/215 (93.02%), Postives = 206/215 (95.81%), Query Frame = 3
Query:   78 MATGT---ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            MAT T   A  PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYREPE
Sbjct:    1 MATATNAAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPE 215          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_VITVI (40S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 3.232e-110
Identity = 194/207 (93.72%), Postives = 199/207 (96.14%), Query Frame = 3
Query:   93 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            AT  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI PGHKWDVMVDLFFYREPE
Sbjct:    2 ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRRTIAPGHKWDVMVDLFFYREPE 208          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_CICAR (40S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 1.040e-108
Identity = 191/209 (91.39%), Postives = 201/209 (96.17%), Query Frame = 3
Query:   90 TATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            T TAP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IVAIEN  DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYREPE
Sbjct:    3 TTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDKLNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPE 211          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_DAUCA (40S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 6.738e-108
Identity = 189/209 (90.43%), Postives = 197/209 (94.26%), Query Frame = 3
Query:   93 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEXT 719
            A+  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV+IENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+VMVDLFFYREPE T
Sbjct:    2 ASGARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQGHKWEVMVDLFFYREPEET 210          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA1_ARATH (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana GN=RPSaA PE=1 SV=3)

HSP 1 Score: 388.652 bits (997), Expect = 2.561e-107
Identity = 189/214 (88.32%), Postives = 199/214 (92.99%), Query Frame = 3
Query:   78 MATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEXT 719
            MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT A+AIAGRHTPGTFTNQMQTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI  G KWDVMVDLFFYREPE T
Sbjct:    1 MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYREPEET 214          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_BRANA (40S ribosomal protein SA OS=Brassica napus GN=LRP PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 1.271e-106
Identity = 188/209 (89.95%), Postives = 195/209 (93.30%), Query Frame = 3
Query:   93 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEXT 719
            A    QLSQKEADI+MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT A+AIAGRHTPGTFTNQMQTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP  KWDVMVDLFFYREPE T
Sbjct:    3 ANGSTQLSQKEADIKMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPAQKWDVMVDLFFYREPEET 211          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA2_ARATH (40S ribosomal protein Sa-2 OS=Arabidopsis thaliana GN=RPSaB PE=1 SV=2)

HSP 1 Score: 385.571 bits (989), Expect = 2.168e-106
Identity = 187/211 (88.63%), Postives = 199/211 (94.31%), Query Frame = 3
Query:   81 ATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            A G ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT  +AIAGRHTPGTFTNQMQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI    KWDVMVDLFFYREPE
Sbjct:    3 ANGVATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVDLFFYREPE 213          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_OSTTA (40S ribosomal protein SA OS=Ostreococcus tauri GN=Ot03g03270 PE=3 SV=2)

HSP 1 Score: 322.398 bits (825), Expect = 2.254e-87
Identity = 155/202 (76.73%), Postives = 175/202 (86.63%), Query Frame = 3
Query:  108 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            Q+SQKEADI MMLAA  HLGTKN DFQMERYV+KRR DGI+IINLGKTW+KL +AARVIVA+ENP D+I Q+ARPYGQRAVLKFA+YT A A+AGRHTPGT+TNQ    F EPR+L++TDPRTD QPI E A  NIPTIAFCDTDSP++ VDI IPANNK K SIGCL++LLARMVLQMRGTI P + WDVMVDLFFYR+PE
Sbjct:    4 QMSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVAVENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDPRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMVDLFFYRDPE 205          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_OSTLU (40S ribosomal protein SA OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_12355 PE=3 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 4.250e-86
Identity = 152/202 (75.25%), Postives = 174/202 (86.14%), Query Frame = 3
Query:  108 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            Q+SQKEADI MMLAA  HLGTKN DFQMERYV+KRR DGI+IINLG+TW+KL +AAR+IVA ENP D+I Q+ARPYGQRAVLKFA+YT A AIAGRHTPGT+TNQ    F EPR+LI+TDPRTD QPI E A  N+PTIAFCDTDSP++ VD+ IPANNK KHSIGCL++LLARMVLQMRGT+   + WDVMVDLFFYR+PE
Sbjct:    4 QMSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGRTWDKLMLAARIIVACENPQDVICQAARPYGQRAVLKFAQYTGAKAIAGRHTPGTYTNQKDAIFAEPRVLIVTDPRTDAQPISETAYVNLPTIAFCDTDSPLKNVDVAIPANNKAKHSIGCLYYLLARMVLQMRGTVSAANPWDVMVDLFFYRDPE 205          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_CHLRE (40S ribosomal protein SA OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_126059 PE=3 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.367e-84
Identity = 151/201 (75.12%), Postives = 173/201 (86.07%), Query Frame = 3
Query:  111 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            LSQKE DIQMMLAA+ HLGTKNC +QMERY+++RR DGIYIINL KT+EKLQMAAR+IVAIENP DI V SARPYGQRAV KFA+Y    ++AGRHTPGTFTNQ+Q +F EPRLLILTDPRTDHQP+KE++  NIPTIAFCDTDSP+ +VD+ IPANNKGKHSIG L++LLARMVL+MR  I   + W V VDLFFYREPE
Sbjct:    3 LSQKEQDIQMMLAAQCHLGTKNCHYQMERYMYRRRQDGIYIINLEKTYEKLQMAARIIVAIENPQDICVLSARPYGQRAVFKFAQYLGCKSMAGRHTPGTFTNQIQKAFEEPRLLILTDPRTDHQPVKESSYMNIPTIAFCDTDSPLTHVDVAIPANNKGKHSIGVLYFLLARMVLEMRDQINVTNPWSVPVDLFFYREPE 203          
The following BLAST results are available for this feature:
BLAST of EY692887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_SOYBN6.957e-11393.0240S ribosomal protein SA OS=Glycine max PE=2 SV=1[more]
RSSA_VITVI3.232e-11093.7240S ribosomal protein SA OS=Vitis vinifera GN=GSVI... [more]
RSSA_CICAR1.040e-10891.3940S ribosomal protein SA OS=Cicer arietinum GN=RAP... [more]
RSSA_DAUCA6.738e-10890.4340S ribosomal protein SA OS=Daucus carota GN=179B ... [more]
RSSA1_ARATH2.561e-10788.3240S ribosomal protein Sa-1 OS=Arabidopsis thaliana... [more]
RSSA_BRANA1.271e-10689.9540S ribosomal protein SA OS=Brassica napus GN=LRP ... [more]
RSSA2_ARATH2.168e-10688.6340S ribosomal protein Sa-2 OS=Arabidopsis thaliana... [more]
RSSA_OSTTA2.254e-8776.7340S ribosomal protein SA OS=Ostreococcus tauri GN=... [more]
RSSA_OSTLU4.250e-8675.2540S ribosomal protein SA OS=Ostreococcus lucimarin... [more]
RSSA_CHLRE1.367e-8475.1240S ribosomal protein SA OS=Chlamydomonas reinhard... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-E05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692887 ID=EY692887; Name=EY692887; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGAGCGAGCAGAAGTCTCCGTCGGTACCACGAGTCTCAGCT
TTCTCTCGCAGGTTTTAAGAAATAAAGATGGCGACCGGAACAGCAACGGC
CCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGTTAGCCG
CCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAACGTTAC
GTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGGTAAGAC
TTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTGAAAACC
CTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGAGCTGTG
TTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAGGCACAC
TCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGCCCCGAC
TTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAGGAAGCT
GCCCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTCACCTAT
GCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAACACAGCA
TTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATGCGCGGC
ACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGTTCTTCTA
CAGGGAGCCAGAAGNAACAAGCAGGCTGAAGAAAAGAAACTGCTGCTATT
GATTATGCTACAGCAGAGTACACACGAATCTTTACAGTGGTGATCATGGG
CTTCCCAATGCTGATNGTGGGTGGGCGGNTGGTGAANTCAGAACCCATTC
CTGGTGTCCTATTCCCAGAGCACACAGCACTACAGTCCTTGGTGGGGATG
ATGGGATCATGCCGC
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