EY692819

Overview
NameEY692819
Unique NameEY692819
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692819 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.899e-27
Identity = 92/243 (37.86%), Postives = 128/243 (52.67%), Query Frame = 2
Query:   41 HPDTFTKMCKLRFLKFYNSKDDGENKCKVSYLVGPGF--AEVRYLHWYGYPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHN--------GKLKQIISRACNFFTKSP----------------NHSLTL-----HLDKLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSSIECLSRLSALYLDNCKRLKSLPAA-YVN*TL*TLFISG 673
            +P+ F KMC LR LK Y SK   E K  VS+  G  +  +++R LHW  YPL SLP + +PE LV + +P    ++LW   +           KLK++     +  TK P                N  L+L     +L KLV LNL  C  L  +P+ +  LE L+ L+L GCSKL   PEIS   N++ +Y+ GT I+E+PSSI+ L  L  L L+N + LK+LP + Y    L TL +SG
Sbjct: 1168 NPNVFEKMCNLRLLKLYCSK--AEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPS-MVDLESLEVLNLSGCSKLGNFPEISP--NVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSG 1405          
BLAST of EY692819 vs. ExPASy Swiss-Prot
Match: Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 70/227 (30.84%), Postives = 110/227 (48.46%), Query Frame = 2
Query:   35 YLHPDTFTKMCKLRFLKFYNSKD-DGENKCKVSYLVGPGFA---EVRYLHWYGYPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHNGKLKQIISRACNFFTKSPN---------------------HSLTLHLDKLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSSIECLSRLSALYLDNCKRLKSLPAAYV 640
            Y+   TF +M  L +LKFY S   D + K K+  L   G +   ++R LHW  YPL+  PS+  PE LV + M H  +++LW  V+    L+ +   +       PN                      S   +L  L+ L ++ CK L I+P  I  L  L+ L    C++L+T PEIS+  NI ++ L GTAI E+P S++  S++  + ++  K  + +   YV
Sbjct:  544 YISEKTFEEMRNLVYLKFYMSSPIDDKMKVKLQ-LPEEGLSYLPQLRLLHWDAYPLEFFPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNI-NLPSLEVLHFRYCTRLQTFPEIST--NIRLLNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYV 766          
BLAST of EY692819 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.682e-17
Identity = 69/188 (36.70%), Postives = 94/188 (50.00%), Query Frame = 2
Query:   23 NKRDYLHPDTFTKMCKLRFLKFYNSKDDGENKCKVSYLVGPGFA---EVRYLHWYGYPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHNGKLKQIISRACNFFTKSPNHSLT-----LHLDKLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSS 562
            N R  L P  F  M  LR LK Y S    E    +++  G   +   E+R LHW  YPLKSLP N  P  LV I MP+  +Q+LW   ++   L+ I  R C+      +H L      L  + L  ++L  C  L+  PA   RL  L+ ++L GC K+K++ EI    NIE ++L GT I  LP S
Sbjct:  510 NLRFDLQPSAFKNMLNLRLLKIYCSNP--EVHPVINFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTI--RLCH------SHHLVDIDDLLKAENLEVIDLQGCTRLQNFPAA-GRLLRLRVVNLSGCIKIKSVLEIPP--NIEKLHLQGTGILALPVS 684          
BLAST of EY692819 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.814e-15
Identity = 63/174 (36.21%), Postives = 85/174 (48.85%), Query Frame = 2
Query:   53 FTKMCKLRFLKFYNSKDDGE---NKCKVSYLVGPGFAEVRYLHWYGYPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHNGKLKQIISRACNFFTKSPNHSLTLHLDKLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSSI 565
            F  M  LR  K Y+S  +     N  K S    P    +R LHW  YPL+ LP N  P  LV I MP+  +++LW   +    LK I  R C+         L L    L  ++L  C  L+  PA   +L  L+ ++L GC+++K+ PEI    NIE + L GT I ELP SI
Sbjct:  513 FDNMLNLRLFKIYSSNPEVHHVNNFLKGSLSSLPNV--LRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTI--RLCHSQQLVDIDDL-LKAQNLEVVDLQGCTRLQSFPA-TGQLLHLRVVNLSGCTEIKSFPEIPP--NIETLNLQGTGIIELPLSI 678          
BLAST of EY692819 vs. ExPASy Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.164e-14
Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = 2
Query:  182 YPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHNGKLKQIISRACNFFTKSP----------------------NHSLTLHLDKLVNLNLNNCKSLRILPAGIFRLEFLKELDLWGCSKLKTLPEISSAGNIEV-MYLNGTAIEELPSSI-ECLSRLSALYLDNCKRLKSLPAA 634
            YP +S PS    + LV +++ H +++ LW + +H   L++I        T++P                      +HSL     K++ L LN+CKSL+  P     +E L+ L L  C  L+ LPEI      E+ +++ G+ I ELPSSI +  + ++ L L N K L +LP++
Sbjct:  584 YPWESFPSTFELKMLVHLQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVHHSLGC-CSKVIGLYLNDCKSLKRFPC--VNVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSS 755          

HSP 2 Score: 26.5646 bits (57), Expect = 4.164e-14
Identity = 15/36 (41.67%), Postives = 22/36 (61.11%), Query Frame = 1
Query:  625 PSSLCKLNSLNFIYLRWCSSLKSCLMNLEIRSFDSL 732
            PSS+C+L SL  + +  CS L+S  +  EI   D+L
Sbjct:  753 PSSICRLKSLVSLSVSGCSKLES--LPEEIGDLDNL 786          
The following BLAST results are available for this feature:
BLAST of EY692819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
WRK19_ARATH8.899e-2737.86Probable WRKY transcription factor 19 OS=Arabidops... [more]
Y4117_ARATH6.830e-1930.84Putative disease resistance protein At4g11170 OS=A... [more]
WRK52_ARATH1.682e-1736.70Probable WRKY transcription factor 52 OS=Arabidops... [more]
WRK16_ARATH7.814e-1536.21Probable WRKY transcription factor 16 OS=Arabidops... [more]
TMVRN_NICGU4.164e-1430.29TMV resistance protein N OS=Nicotiana glutinosa GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692819 ID=EY692819; Name=EY692819; organism=Citrus sinensis; type=EST; length=855bp
GTATCTGCTTTGATATGTCTAGAATAAAAGAGACTATCTGCATCCAGATA
CTTTCACAAAGATGTGTAAATTGAGATTTTTGAAATTCTATAACTCTAAA
GATGATGGAGAGAACAAATGTAAGGTGTCTTATTTGGTAGGACCTGGATT
TGCTGAAGTGAGGTATCTTCACTGGTATGGATATCCACTAAAATCATTGC
CGTCAAATATTCATCCAGAGAAACTTGTTTCAATTGAAATGCCTCATGGT
AATATTCAACAACTTTGGGATGATGTCGAGCATAATGGTAAGTTAAAGCA
GATAATAAGCCGGGCCTGCAATTTTTTCACCAAATCTCCAAACCACTCGT
TGACCCTGCATCTGGACAAGCTAGTTAACCTCAATCTAAACAATTGCAAA
AGCTTGAGAATTCTTCCAGCTGGAATATTTCGTTTGGAATTTCTTAAAGA
ACTTGATCTTTGGGGCTGCTCAAAACTAAAAACACTTCCAGAGATATCAT
CAGCTGGTAATATAGAAGTGATGTATTTAAATGGAACTGCAATTGAAGAA
CTGCCTTCATCCATAGAATGTCTGTCTCGGCTTTCGGCCTTATACCTTGA
TAATTGTAAAAGGCTGAAGAGTCTCCCAGCAGCCTATGTAAATTGAACTC
TCTGAACTTTATTTATCTCAGGTGGTGCTCAAGTCTTAAGAGTTGCCTGA
TGAACTTGGAAATTAGAAGCTTTGACAGTTTGATTGCTGAAGGACTGCTA
TAAAGAAATGCCGTTGCCATTGGTGGTTGAACAATTTGATAGCTTGCAAA
TCTGACGTCTTTATCTAACTGATTGCGGATCACGGAGTACTGGAATCTCG
NCAGT
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