EY692712

Overview
NameEY692712
Unique NameEY692712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9241 contig Csv1_Contig9241:1..576. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 5.768e-72
Identity = 126/159 (79.25%), Postives = 149/159 (93.71%), Query Frame = 2
Query:   98 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            MAIP+P+RQLFI+GEWREP+LKKRIPIVNP TEE++GDIPAAT EDV++AV+AAR+ALSRNKGKDW+ A GA RAKYLRAIAAK+ ERK++LA LE +DCGKPL+EAVWD+DDVAGCFE+YADLAEGL A+ KAPVSLP+E+FKSYVLK+P+GVVGLIT
Sbjct:    1 MAIPMPTRQLFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAKAPGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAEGLDAKQKAPVSLPMESFKSYVLKQPLGVVGLIT 159          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BADH2_ARATH (Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.587e-67
Identity = 118/159 (74.21%), Postives = 140/159 (88.05%), Query Frame = 2
Query:   98 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            MAI +P RQLFI G+W EPVL+K +P+VNP TE+I+G IPAAT+EDVELAV+AAR+A +RN GKDW+ A+GA RAKYLRAIAAK+ ERKSELANLE IDCGKPL+EA WD+DDVAGCFEYYADLAEGL A+ K P+SLP++ FK Y+LKEPIGVVG+IT
Sbjct:    1 MAITVPRRQLFIGGQWTEPVLRKTLPVVNPATEDIIGYIPAATSEDVELAVEAARKAFTRNNGKDWARATGAVRAKYLRAIAAKVIERKSELANLEAIDCGKPLDEAAWDMDDVAGCFEYYADLAEGLDAKQKTPLSLPMDTFKGYILKEPIGVVGMIT 159          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BADH_AMAHP (Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus GN=BADH4 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.797e-65
Identity = 120/159 (75.47%), Postives = 140/159 (88.05%), Query Frame = 2
Query:   98 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            MAI +PSRQLFI+GEWREP+ K RIPI+NP+TEEI+GDIPAATAEDVELAV AAR+AL RNKG+DW+SASGA RAKYLRAIAAKITE+K   A LE +DCGKPL+EA  DIDDVAGCFEYYAD AE L A+ KAP++LP++ FK +VLK+PIGVVGLI+
Sbjct:    1 MAIRVPSRQLFIDGEWREPIKKNRIPIINPSTEEIIGDIPAATAEDVELAVAAARRALKRNKGEDWASASGAHRAKYLRAIAAKITEKKDYFAKLEAMDCGKPLDEAARDIDDVAGCFEYYADQAEALDAKQKAPIALPMDTFKCHVLKQPIGVVGLIS 159          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.020e-60
Identity = 109/159 (68.55%), Postives = 136/159 (85.53%), Query Frame = 2
Query:   98 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            M++PIPSRQLFI+GEWREP+ K RIPI+NP+ EEI+GDIPA ++ED+E+AV AAR+AL RNKG++W++ SGA RA+YLRAIAAK+TERK     LETID GKP +EAV DIDDVA CFEY+A  AE + A+ KAPV+LP+E FKS+VL++PIGVVGLIT
Sbjct:    1 MSMPIPSRQLFIDGEWREPIKKNRIPIINPSNEEIIGDIPAGSSEDIEVAVAAARRALKRNKGREWAATSGAHRARYLRAIAAKVTERKDHFVKLETIDSGKPFDEAVLDIDDVATCFEYFAGQAEAMDAKQKAPVTLPMERFKSHVLRQPIGVVGLIT 159          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BADH_ATRHO (Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.056e-57
Identity = 113/162 (69.75%), Postives = 135/162 (83.33%), Query Frame = 2
Query:   98 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGC---FEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            MA PIP+RQLFI+GEWREP+LK RIPI+NP+TEEI+GDIPAATAEDVE+AV AAR+A  RNKG+DW +A  + RAKYLRAIAAKITE+K     LET+D GKP +EAV DIDDVA C   FEY+A  AE L A+ KAPV+LP+E FKS+VL++PIGVVGLI+
Sbjct:    1 MAFPIPARQLFIDGEWREPLLKNRIPIINPSTEEIIGDIPAATAEDVEVAVVAARKAFKRNKGRDW-AALWSHRAKYLRAIAAKITEKKDHFVKLETLDSGKPRDEAVLDIDDVATCFEYFEYFAGQAEALDAKQKAPVTLPMERFKSHVLRQPIGVVGLIS 161          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BADH_SPIOL (Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.379e-57
Identity = 109/159 (68.55%), Postives = 131/159 (82.39%), Query Frame = 2
Query:   98 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            MA PIP+RQLFI+GEWREP+ K RIP++NP+TEEI+GDIPAATAEDVE+AV AAR+A  RN   +WS+ SGA RA YLRAIAAKITE+K     LETID GKP +EAV DIDDVA CFEY+A  AE L  + KAPV+LP+E FKS+VL++P+GVVGLI+
Sbjct:    1 MAFPIPARQLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRN---NWSATSGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALDGKQKAPVTLPMERFKSHVLRQPLGVVGLIS 156          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BADH_ORYSJ (Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.073e-57
Identity = 110/161 (68.32%), Postives = 128/161 (79.50%), Query Frame = 2
Query:   92 MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            MA    IP R LFI G WREP L +R+P+VNP TE  +GDIPAATAEDVELAV AAR A  R+ G+ WS A GA RAKYL+AIAAKI ++KS LA LET+D GKPL+EA  D++DVA CFEYYADLAE L  + +AP+SLP+ENF+SYVLKEPIGVVGLIT
Sbjct:    1 MAAPSAIPRRGLFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSRAPGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACFEYYADLAEALDGKQRAPISLPMENFESYVLKEPIGVVGLIT 161          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BADH_HORVU (Betaine aldehyde dehydrogenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.297e-51
Identity = 104/161 (64.60%), Postives = 122/161 (75.78%), Query Frame = 2
Query:   92 MAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            MA    IP R LFI G WREP L + IP++NP TE+ +GDIPAATAEDVELAV A    L+R + + W+ ASGA RAKYL AIAAKIT + + LA LET+D GKP +EAV D+DDVA CFEYYA LAE L  +  AP+SLP+E FK+YVLKEPIGVVGLIT
Sbjct:    1 MAAPPAIPRRGLFIGGGWREPTLGRHIPVINPATEDTIGDIPAATAEDVELAVAAGGPVLARRR-EPWARASGATRAKYLNAIAAKITGKIAYLALLETVDSGKPKDEAVADMDDVAACFEYYAALAEALDGKQHAPISLPMEEFKTYVLKEPIGVVGLIT 160          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.593e-21
Identity = 60/153 (39.22%), Postives = 88/153 (57.52%), Query Frame = 2
Query:  116 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            S+ LFI+GEW     ++   I+NP  +E +  +     ED   A+ AAR+A  +    +WSS SG  R K +  IA  I     ELA LE++D GK LEE+  D+DD+A  F+YYA LA+    +    +S P+ + +S +++EPIGV G IT
Sbjct:    2 SQTLFIDGEWISAEKEQIRSIINPFNQEEIATVSEGGREDAIKAIAAARRAFDKG---EWSSLSGLERGKIVLKIAELIRRDLEELAELESLDTGKTLEESKADMDDIANVFQYYAGLADKDGGEI---ISSPIPDSESKIIREPIGVCGQIT 148          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BADH_SCHPO (Probable betaine aldehyde dehydrogenase OS=Schizosaccharomyces pombe GN=meu8 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.593e-21
Identity = 62/159 (38.99%), Postives = 91/159 (57.23%), Query Frame = 2
Query:  113 PSRQLFINGEWREPV--LKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLEN---FKSYVLKEPIGVVGLIT 574
            P   LFI+G++  P+    K IP++NP TEEI+G    A+A+DV+ AV+ A       +   W+   G  R   LR IA  + E++  LA ++TI+CGKP   A++DID  A  FEYYA++AE         V +PL N   F ++  + P GV+G+IT
Sbjct:   19 PENSLFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF---RSGIWAKWPGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAE----TDNPTVKVPLPNNPGFCAFEKRFPRGVIGVIT 170          
The following BLAST results are available for this feature:
BLAST of EY692712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
BADH1_ARATH5.768e-7279.25Betaine aldehyde dehydrogenase 1, chloroplastic OS... [more]
BADH2_ARATH5.587e-6774.21Betaine aldehyde dehydrogenase 2, mitochondrial OS... [more]
BADH_AMAHP1.797e-6575.47Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]
BADH_BETVU1.020e-6068.55Betaine aldehyde dehydrogenase, chloroplastic OS=B... [more]
BADH_ATRHO1.056e-5769.75Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]
BADH_SPIOL1.379e-5768.55Betaine aldehyde dehydrogenase, chloroplastic OS=S... [more]
BADH_ORYSJ3.073e-5768.32Betaine aldehyde dehydrogenase OS=Oryza sativa sub... [more]
BADH_HORVU4.297e-5164.60Betaine aldehyde dehydrogenase OS=Hordeum vulgare ... [more]
BETB_BACSU1.593e-2139.22Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]
BADH_SCHPO1.593e-2138.99Probable betaine aldehyde dehydrogenase OS=Schizos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-F04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692712 ID=EY692712; Name=EY692712; organism=Citrus sinensis; type=EST; length=576bp
CCGGNATTCAAAAACTGACCCACGCGTNCGACCCGAAACTTTTATTAAAC
ANAGAAAAAATAAAAGCCAAAAAACCGAGAGAAGAGGAAAAATGGCGATG
GCGATCCCAATCCCAAGTCGTCAGCTGTTCATCAACGGTGAATGGAGAGA
GCCCGTTCTCAAGAAACGCATCCCAATCGTTAATCCCACCACTGAAGAGA
TCGTCGGTGATATTCCAGCAGCTACTGCTGAAGATGTTGAGCTGGCTGTT
GATGCCGCCCGTCAAGCACTTTCTAGAAACAAAGGGAAGGATTGGTCCTC
TGCATCCGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGA
TAACAGAGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGTGGG
AAGCCACTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTGTTT
TGAGTACTATGCAGACCTTGCTGAAGGCTTANATGCCCAAACAAAAGCTC
CTGTTTCTCTTCCTCTGGAGAATTTCAAGAGTTATGTACTTAAGGAACCC
ATTGGGGTTGTTGGATTGATTACTCC
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