EY692685

Overview
NameEY692685
Unique NameEY692685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length945
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692685 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.151e-11
Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 1 
Query:  352 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHMLAKLSDGQLIDS-KLECLYHGWQFESEGKCXNIP 609
            +++ W + WYP+ L +D+  + P    +  + +VL+ D   +      D CPH LA LS+G+L ++  L+C YHGW F   G C  IP
Sbjct:   80 SEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIP 167
[Close]
BLAST of EY692685 vs. ExPASy Swiss-Prot
Match: CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 26/78 (33.33%), Postives = 45/78 (57.69%), Query Frame = 1 
Query:  376 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHMLAKLSDGQLIDSKLECLYHGWQFESEGKCXNIP 609
            WYP   +  +P D  +   +F +  V+++D KG+  C +D C H    LS G++++ ++ C YHGW+F  +G C  +P
Sbjct:  305 WYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQVMCPYHGWEFNGDGACTKMP 382
The following BLAST results are available for this feature:
BLAST of EY692685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PAO_ARATH6.151e-1135.23Pheophorbide a oxygenase, chloroplastic OS=Arabido... [more]
CAO_CHLRE8.034e-1133.33Chlorophyllide a oxygenase, chloroplastic OS=Chlam... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-D01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692685 ID=EY692685; Name=EY692685; organism=Citrus sinensis; type=EST; length=945bp
CCACGCGTCCGGCCTTCTCCTTCCTTCACTTCATCTTCTTCCTCAACAGA
GCAGCCACATAGAACAACACGCATCATGACGGCTCTATCATCATTACACT
CGCTATTCTTTATCCCACTTCTCAAAATCCCTTCACCTAAACTTAAACCG
TCACCATTTTTTACACCACCAACAACGGGAAATGTTATAAGCCCCATCAA
AGCGCATAAGTTGAGAAAAAGAACGGAACCTAAGTTGACAAAATGCCATG
CAGTGACAGATATGATCAGTAGTGCCGTGCCTACACCTGATGATCATAAA
GTTCTCGTGGGGCCTGCAAGTGAGGAGGAAAGCANATGATATATACGGGT
GGCAGATTATGATTGGACAGAAGAGTGGTATCCATTGTATCTCACTAAAG
ATGTTCCTGATGATGCACCTTTGGGACTCACTGTGTTTGATCAGCAGATC
GTATTGTATAAAGATGGCAAGGGGGAGCTTCGGTGTCATCAAGATCGGTG
CCCCCATATGTTAGCAAAACTCTCTGATGGCCAACTGATTGACAGTAAGC
TTGAATGTTTGTATCACGGCTGGCAGTTTGAAAGCGAAGGTAAATGTNGT
AATATACCTCANNCTNCAGCTGATGCTAAAATTNCTCGATCGGCTTGTGT
AAAACGTATGAAGTGATGGATNCCCNAAGTGTGTATGGGGTTTGATGTCA
CAAATACACCGNCTACCCTGATAAGCTNCATGGTTTGAGACTTTGCCAGC
CAAGGTTTAAGATGTCTAACAATCCATGAACTTCCTATGATCACCCATAC
TCCTTGAGAACCTAATGGTNCCNGCCTATCCCATCTNAACGATAAGACGA
CTATTTGCTAAAGATAATATGCCACCCCTGGCTTGAGTGACTGACGTNCN
ATCCAGATTGCAGCCATGGGTAAGGAAATAATGTAATGCCAACTT
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