EY692672

Overview
NameEY692672
Unique NameEY692672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7319 contig Csv1_Contig7319:443..1286. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GAT10_ARATH (GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.468e-39
Identity = 108/266 (40.60%), Postives = 128/266 (48.12%), Query Frame = 1
Query:    4 RVRDEDSFSGGSLTMSKQES-STITKDDSSHNQFQTXXXXXXXXXXXXXXGEKTVLGSPETTXXXXXXXXXXXXXXXXTFNPRPPVQLVSPTSSVTETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHXXXXXXXLSVP-KVSDETSEVGPTQAV---------------RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVGCTXTXMTDAPELIPKH 750
            +V    SF   +L   K++S ST T   SSH+QF++                     S   T                T  PRPPVQ             + R+       D+    +SRL+I+IPKQF  +H            K++  +S  G    V               RKCMHCE+TKTPQWR GPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF P+LHSNSHKKV EMRNK C     G   T   D   LIP +
Sbjct:   82 KVERPPSFVEETLVEKKEDSFSTNTDSSSSHSQFRSSSPVSVLESS----------SSSSQTTNTTSLVLPGKHGRPRTKRPRPPVQ------------DKDRV------KDNVCGGDSRLIIRIPKQFLSDHNKMINKKKKKKAKITSSSSSSGIDLEVNGNNVDSYSSEQYPLRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNSHKKVAEMRNKRCSD---GSYITEENDLQGLIPNN 316          
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GATA6_ARATH (GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.457e-29
Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 1
Query:  475 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKN 681
            VRKC HCE TKTPQWR GP GPKTLCNACGVR++SGRL PEYRPA+SPTF+P++HSNSH+K++EMR K+
Sbjct:  219 VRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHRKIIEMRRKD 287          
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GAT14_ARATH (GATA transcription factor 14 OS=Arabidopsis thaliana GN=At5g66320 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28
Identity = 57/99 (57.58%), Postives = 66/99 (66.67%), Query Frame = 1
Query:  448 TSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVGCTXTXMTDAPELIP 744
            + E+   Q  RKC HC + KTPQWRAGPMG KTLCNACGVRYKSGRL PEYRPA SPTF   LHSN H+KV+EMR K             +  +P+ +P
Sbjct:  239 SGELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKEPTSDNETGLNQLVQSPQAVP 337          
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GATA5_ARATH (GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27
Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 1
Query:  475 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKN 681
            VR C HCE   TPQWR GP GPKTLCNACGVR+KSGRL PEYRPA+SPTF+PS+HSNSH+K++EMR K+
Sbjct:  217 VRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIPSVHSNSHRKIIEMRKKD 285          
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GAT11_ARATH (GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.923e-27
Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 1
Query:  442 DETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNK 678
            D   + G +   R+C+HC   KTPQWR GPMGPKTLCNACGVRYKSGRL PEYRPA+SPTFV + HSNSH+KV+E+R +
Sbjct:  185 DMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVMARHSNSHRKVMELRRQ 263          
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GATA1_ARATH (GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.124e-27
Identity = 53/67 (79.10%), Postives = 56/67 (83.58%), Query Frame = 1
Query:  478 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNK 678
            RKC HC   KTPQWRAGP GPKTLCNACGVRYKSGRL PEYRPA SPTF   LHSNSH+K+VEMR +
Sbjct:  194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRKIVEMRKQ 260          
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GAT13_ARATH (GATA transcription factor 13 OS=Arabidopsis thaliana GN=At5g25830 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.124e-27
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 1
Query:  478 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNK 678
            R+C+HC   KTPQWR GPMGPKTLCNACGVRYKSGRL PEYRPAASPTFV + HSNSH+KV+E+R +
Sbjct:  219 RRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQ 285          
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GATA2_ARATH (GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.491e-26
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 1
Query:  439 SDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNK 678
            S ET+E G    +R+C HC   KTPQWR GP+GPKTLCNACGVR+KSGRL PEYRPA+SPTFV + HSNSH+KV+E+R +
Sbjct:  169 SSETTEGG---GMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQ 245          
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GATA9_ARATH (GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.338e-26
Identity = 59/99 (59.60%), Postives = 65/99 (65.66%), Query Frame = 1
Query:  382 QFNPEHXXXXXXXLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNK 678
            QF  E          V K + +T     TQ  R+C HC + KTPQWRAGP+G KTLCNACGVRYKSGRL PEYRPA SPTF   LHSN H KV+EMR K
Sbjct:  190 QFLDEPMTKTQKKKKVWKNAGQTQTQTQTQT-RQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRK 287          
BLAST of EY692672 vs. ExPASy Swiss-Prot
Match: GATA4_ARATH (GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.338e-26
Identity = 51/71 (71.83%), Postives = 60/71 (84.51%), Query Frame = 1
Query:  478 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQK 690
            R+C HC   KTPQWR GP+GPKTLCNACGVRYKSGRL PEYRPA+SPTFV + HSNSH+KV+E+R +  Q+
Sbjct:  158 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKEQQ 228          
The following BLAST results are available for this feature:
BLAST of EY692672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
GAT10_ARATH4.468e-3940.60GATA transcription factor 10 OS=Arabidopsis thalia... [more]
GATA6_ARATH2.457e-2976.81GATA transcription factor 6 OS=Arabidopsis thalian... [more]
GAT14_ARATH7.905e-2857.58GATA transcription factor 14 OS=Arabidopsis thalia... [more]
GATA5_ARATH1.032e-2775.36GATA transcription factor 5 OS=Arabidopsis thalian... [more]
GAT11_ARATH3.923e-2767.09GATA transcription factor 11 OS=Arabidopsis thalia... [more]
GATA1_ARATH5.124e-2779.10GATA transcription factor 1 OS=Arabidopsis thalian... [more]
GAT13_ARATH5.124e-2777.61GATA transcription factor 13 OS=Arabidopsis thalia... [more]
GATA2_ARATH1.491e-2667.50GATA transcription factor 2 OS=Arabidopsis thalian... [more]
GATA9_ARATH4.338e-2659.60GATA transcription factor 9 OS=Arabidopsis thalian... [more]
GATA4_ARATH4.338e-2671.83GATA transcription factor 4 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-B12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692672 ID=EY692672; Name=EY692672; organism=Citrus sinensis; type=EST; length=845bp
CCACGCGTCCGTGATGAGGATTCCTTCTCTGGAGGAAGCCTTACTATGAG
CAAACAAGAGTCATCCACGATCACCAAGGACGATTCATCTCACAACCAGT
TTCAGACCTCCAGCCCGGTCTCTGTTTTAGAGAGCAGCAGCTCCTGCTCG
GGGGAGAAAACCGTGTTGGGAAGCCCTGAGACTACGGCCCCTGGGAGGCG
CGGGCGTGCTCGTAGCAAGCGCCCTCGCCCTGCAACATTTAATCCCCGTC
CTCCGGTTCAACTTGTGTCGCCAACTTCCTCAGTCACTGAGACACAACCA
CAGCATCGCTTAATTGCCCCCAAGGCCTCATCTGATTCTGAGAATTTTGC
AGAGTCTCGCCTTGTGATTAAAATACCAAAGCAATTCAACCCGGAGCACA
AGAAGAAAAAGAAAATCAAATTGTCAGTTCCAAAAGTTTCCGATGAGACT
AGTGAAGTTGGGCCAACACAAGCGGTTAGGAAATGCATGCATTGCGAGAT
AACGAAGACGCCTCAATGGAGAGCAGGGCCAATGGGGCCAAAAACCCTTT
GCAATGCATGCGGTGTTCGCTATAAGTCTGGCAGGCTCTTCCCCGAATAC
AGGCCTGCTGCTAGCCCGACATTTGTCCCATCCTTGCACTCCAATTCCCA
CAAAAAGGTTGTTGAAATGAGAAACAAGAATTGCCAGAAGCCAATTGTGG
GCTGCACTGNAACGATNATGACAGATGCACCAGAGTTGATTCCAAAACAT
ACCACCTTGCGCTGGAGTACGTTTGAAGGATCAAGACNGCTCANAGACAG
CATTCCCTGACGGGATATCTCTTTCCGGNNCTTGTATTGCCTATG
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