EY692588

Overview
NameEY692588
Unique NameEY692588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12302 contig Csv1_Contig12302:167..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY692588 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 4.240e-73
Identity = 139/292 (47.60%), Postives = 198/292 (67.81%), Query Frame = 1 
Query:   37 DLKENFIELKEAKARPLSLDDDIAIRVNPFLHKLVNDYGKNSFMWFGPTPRVNIMNPDQIKEIFTRINDF*KVNSI--PLSRLLIVGLATLEGEKWAKHRKLINPAFHQEKLKLMLPAFYLSCIEIITKWEKQMSVEGSSELDVWPYLANLTGDVISRTAFGSSYEEGRRIFQLQAELAELTMQVFRSVHIPGWRFLPTKRNRRMKEIDKEIRASLMGIIKNKEKAMKAGEAANDDLXGILMETSFREIEEHGNKXXCGVSMNDVIEECSYFTLPAGDYL-CLL*WTMGLLS 903
            D+KE+    +EA ++P+  ++DI  R+ P ++  +N YG+NSF W G  PR+++M P+ IKE+ T  + + K   +  PL + L+ G+ + EG KW+KHR++I+PAF  EKLK MLPAF +   +++TKWEK    +GS E+D++P    LT DVIS+ AFGS+YEEG +IF+L  EL +LT+   R V+IPGW +LPTKRN+RMKEI+KEI   L  II  + KA+KAGE   DDL G+L+E++ +EI++ GNK   G+S+NDVIEEC  F     +    LL WT  LLS
Sbjct:   58 DVKESGKMHQEALSKPMEFNNDIVPRLMPHINHTINTYGRNSFTWMGRIPRIHVMEPELIKEVLTHSSKYQKNFDVHNPLVKFLLTGVGSFEGAKWSKHRRIISPAFTLEKLKSMLPAFAICYHDMLTKWEKIAEKQGSHEVDIFPTFDVLTSDVISKVAFGSTYEEGGKIFRLLKELMDLTIDCMRDVYIPGWSYLPTKRNKRMKEINKEITDMLRFIINKRMKALKAGEPGEDDLLGVLLESNIQEIQKQGNKKDGGMSINDVIEECKLFYFAGQETTGVLLTWTTILLS 349
The following BLAST results are available for this feature:
BLAST of EY692588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C72A1_CATRO4.240e-7347.60Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-C07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692588 ID=EY692588; Name=EY692588; organism=Citrus sinensis; type=EST; length=935bp
CCACGCGTCCGCCCACGCGTTTGCCCACGCGTCCGTGACTTGAAAGAAAA
TTTCATCGAGTTGAAGGAAGCAAAAGCCAGACCCCTCAGTTTGGATGACG
ATATTGCTATTCGTGTCAATCCATTCCTTCATAAACTGGTAAATGATTAT
GGTAAGAATTCTTTCATGTGGTTTGGTCCGACACCAAGGGTGAATATTAT
GAATCCTGATCAAATAAAAGAGATATTTACCAGGATCAATGATTTTTAAA
AAGTCAATTCAATCCCACTTTCCAGGCTGCTGATAGTTGGATTGGCTACC
CTTGAGGGGGAGAAGTGGGCTAAACATAGAAAACTCATCAACCCAGCCTT
CCACCAAGAGAAGCTCAAGCTTATGTTGCCAGCATTCTACTTGAGTTGTA
TCGAAATAATTACAAAATGGGAGAAGCAAATGTCTGTAGAAGGATCATCT
GAGTTGGATGTATGGCCTTATCTTGCAAATTTGACAGGTGATGTGATTTC
TCGAACGGCTTTTGGGAGTAGTTATGAAGAAGGAAGAAGGATTTTTCAGC
TCCAGGCAGAGCTAGCTGAACTCACAATGCAAGTCTTTCGTTCAGTTCAC
ATTCCAGGATGGAGGTTTTTACCTACNAAGAGAAATAGGAGAATGAAAGA
AATTGACAAGGAAATCCGGGCTTCATTGATGGGAATCATCAAAAATAAGG
AGAAGGCAATGAAAGCAGGGGAAGCTGCGAACGATGACTTGNTAGGCATA
CTGATGGAAACCAGTTTTAGAGAGATTGAAGAACATGGAAATAAACANNA
ATGTGGGGTCAGCATGAACGATGTGATCGAAGAGTGTAGCTATTTTACTT
TGCCGGCAGGAGACTACCTCTGTTTGCTTTAATGGACGATGGGCTTATTG
AGCAGCATCNAGATTGGCAAAACGGGCAAGGCAAA
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