EY692573

Overview
NameEY692573
Unique NameEY692573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12395 contig Csv1_Contig12395:7..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.951e-15
Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = 1
Query:  514 MALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINW---MNTETCGMPIVSSLSN-DILIHMSSQNQPSCVPLQSIYQTCGTT 771
            MALPVSAIGFEG+EKRLE SFFEPG+FADP G GLRSLS       +    C   IV SLSN D+  ++ S++       + I +TCGTT
Sbjct:    3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAEC--TIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTT 90          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.641e-14
Identity = 48/89 (53.93%), Postives = 58/89 (65.17%), Query Frame = 1
Query:  517 ALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINW---MNTETCGMPIVSSLSN-DILIHMSSQNQPSCVPLQSIYQTCGTT 771
            ALPVSAIGFEG+EKRLE SFFEPG+FADP G GLRSLS       +    C   IV SLSN D+  ++ S++       + I +TCGTT
Sbjct:    4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAEC--TIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTT 90          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.884e-14
Identity = 59/136 (43.38%), Postives = 75/136 (55.15%), Query Frame = 1
Query:  514 MALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSL--SNINWMNTETCGMPIVSSLSNDIL-IHMSSQNQPSCVPLQSIYQTCGTTSCFFH-PCHPQVAESSRCLVDLGEHSGSSYCW--AQPFTRSSLRSTV 903
            MALP SAIGFEGYEKRLE SFFE   FADP G GLR+L  S I+ +  E     IV SLSN  L  ++ S++     P + I +TCGTT      P   ++AES    V   +++  S+ +  AQ F   S    V
Sbjct:    1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEI-LEPAECTIVDSLSNQYLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPAILKLAESLSLSVRNVKYTRGSFIFPGAQSFPHRSFSEEV 135          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.920e-13
Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  511 KMALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINW---MNTETCGMPIVSSLSNDIL-IHMSSQNQPSCVPLQSIYQTCGTT 771
            +M LPVSAIGFEG+EKRLE SF EPG+FADP G GLRSLS       +    C   IV +LSND +  ++ S++       + I +TCGTT
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAEC--TIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTT 90          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.814e-13
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 1
Query:  514 MALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINWMNT-ETCGMPIVSSLS-NDILIHMSSQNQPSCVPLQSIYQTCGTT 771
            MAL  SAIGFEGYEKRLE SFFE G+F+DP G GLR+LS        +     IVSSLS N++  ++ S++     P + I +TCGTT
Sbjct:    1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTT 88          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.506e-13
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  511 KMALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINW---MNTETCGMPIVSSLSNDIL-IHMSSQNQPSCVPLQSIYQTCGTT 771
            +M LPVSAIGFEG+EKRLE SF EPG+F+DP G GLRSLS       +    C   IV +LSND +  ++ S++       + I +TCGTT
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAEC--TIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTT 90          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.496e-13
Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 1
Query:  514 MALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINW---MNTETCGMPIVSSLSNDIL-IHMSSQNQPSCVPLQSIYQTCGTT 771
            M LPVSAIGFEG+EKRLE SF EPG+FADP G GLRSL+       +    C   IV +LSND +  ++ S++       + I +TCGTT
Sbjct:    1 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAEC--TIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTT 88          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.449e-12
Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = 1
Query:  514 MALPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINWMNT-ETCGMPIVSSLS-NDILIHMSSQNQPSCVPLQSIYQTCGTT 771
            MAL  SAIGFEGYE RLE SFFE G+F+DP G GLR+LS        +     IVSSLS N++  ++ S++     P + I +TCGTT
Sbjct:    1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTT 88          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.217e-12
Identity = 53/133 (39.85%), Postives = 67/133 (50.38%), Query Frame = 1
Query:  520 LPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINWMNTET-CGMPIVSSLSNDIL-IHMSSQNQPSCVPLQSIYQTCGTTSCFFH--PCHPQVAESSRCLVDLGEHSGSSYC-WAQPFTRSSLRSTV 903
            + +SAIGFEGYEKRLE +FFEP +F D  G GLR+L+        T     IVSSLSND L  ++ S++     P + I +TCGTT       P      E S  +  +    GS  C   QPF   S    V
Sbjct:    1 MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQPFPHRSFSEEV 133          
BLAST of EY692573 vs. ExPASy Swiss-Prot
Match: DCAM3_BRAJU (S-adenosylmethionine decarboxylase proenzyme 3 OS=Brassica juncea GN=SAMDC3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.507e-12
Identity = 54/133 (40.60%), Postives = 66/133 (49.62%), Query Frame = 1
Query:  520 LPVSAIGFEGYEKRLESSFFEPGVFADPGGXGLRSLSNINWMNTET-CGMPIVSSLSNDIL-IHMSSQNQPSCVPLQSIYQTCGTTSCFFH--PCHPQVAESSRCLVDLGEHSGSSYC-WAQPFTRSSLRSTV 903
            + +SAIGFEGYEKRLE SFFEP  F D  G GLR+L+        T     IVSSLSND L  ++ S++     P + I +TCGTT       P      E S  +  +    GS  C   QPF   S    V
Sbjct:    1 MALSAIGFEGYEKRLEVSFFEPSFFQDSKGLGLRALTRSQLDEILTPAACEIVSSLSNDHLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQPFPHRSFSEEV 133          
The following BLAST results are available for this feature:
BLAST of EY692573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
DCAM_NICSY6.951e-1554.44S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_TOBAC2.641e-1453.93S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_CATRO5.884e-1443.38S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_SOLTU2.920e-1350.55S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_IPONI3.814e-1351.14S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_DATST6.506e-1349.45S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_SOLCI8.496e-1350.00S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_IPOBA1.449e-1250.00S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM1_ARATH4.217e-1239.85S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM3_BRAJU5.507e-1240.60S-adenosylmethionine decarboxylase proenzyme 3 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-B02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692573 ID=EY692573; Name=EY692573; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGGACGGAAGGAGATCGAAATTCGTTTTGTGAAACAGAGTG
AAAAATCAACCCTTCTTTAATCCTCAAGGAATTTTATTATTTTCTTGGTC
TCTGAATCGAGGGTTTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTATA
TTATCTGAGCAAGGCTGAATGATCTAATGGAGTCAAAAGGTGGTAAGAAG
AAGTCTAGCAGTAGTTCCTTATTCTACGAAGCTCCTCTTGGTTACAGCAT
TGAAGACGTTCGACCTCACGGTGGCATAAAGAAGTTCAGATCAGCTGCAT
ACTCAAACTGCGTCCGCAAACCATCCTGAGATCGTCCAATTTGTCCCATA
CCCCCCCAAAAAAAAGCTCACTACTACTGCAATTTTAATTTTTTTTAGTT
TTAGCCGTCTTAATACTGCAATTTACTTGGCCTATTTCTTTTTCGACTTC
CCTCGTTCTCTCGTTCTGCCCTCTTTGCTCTTTGCAATTGTCATTTGTTT
TCTGTAAGGCAAGATGGCCTTGCCAGTCTCTGCAATTGGATTTGAAGGTT
ATGAAAAGAGGCTTGAAAGTTCCTTTTTTGAGCCTGGTGTCTTTGCTGAT
CCTGGAGGTANGGGCCTCCGCTCTCTGTCAAACATCAATTGGATGAATAC
TGAAACCTGCGGAATGCCAATTGTTTCTTCGTTGTCAAATGACATCTTGA
TTCATATGTCCTCTCAGAATCAGCCCTCTTGTGTACCCTTACAAAGTATT
TATCAAACTTGTGGGACTACCAGCTGCTTCTTTCATCCCTGCCATCCTCA
AGTAGCTGAGTCCTCTCGTTGTCTGGTCGATCTGGGAGAACACTCTGGAA
GCTCATATTGCTGGGCTCAGCCTTTCACACGTAGCTCTCTGAGAAGTACT
GTCCTGATGACACTTTGGCAGTTGGNATGGAAGNCAGCTTT
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