EY692540

Overview
NameEY692540
Unique NameEY692540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9228 contig Csv1_Contig9228:2..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692540 vs. ExPASy Swiss-Prot
Match: PWD_ARATH (Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana GN=GWD3 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.638e-70
Identity = 147/263 (55.89%), Postives = 183/263 (69.58%), Query Frame = 3
Query:   18 KLCTLLLKAVRSTLGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASSTCVNL-----------NPYITHGNDGNFGLKTLXXXXXXTVLDRGVHVSSFSASKAPMLSQGV-STGVILLADADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVXIPFGSMQLALEQSKCMDTFCSFLDK 770
            KLCT+LLKAVR++LGS+GWDV+VPG+  G LVQV+ I PGSL ++   P+IL V+KADGDEEV+AA  NI GV+LLQELPHLSHLGVRARQEK+VFVTC+DD+KV+DI RL GK+VRLEAS + VNL               T   D N   K        ++ D      S S++     S+ + S G+I LADAD  TSG+K+AACG LASL+  S KV+S+ GVPASF VP GV IPFGSM+LAL+Q+   + F S L+K
Sbjct:  676 KLCTVLLKAVRNSLGSEGWDVVVPGSTSGTLVQVESIVPGSLPATSGGPIILLVNKADGDEEVSAANGNIAGVMLLQELPHLSHLGVRARQEKIVFVTCDDDDKVADIRRLVGKFVRLEASPSHVNLILSTEGRSRTSKSSATKKTDKNSLSKKKTDKKSLSIDDEESKPGSSSSNSLLYSSKDIPSGGIIALADADVPTSGSKSAACGLLASLAEASSKVHSEHGVPASFKVPTGVVIPFGSMELALKQNNSEEKFASLLEK 938          

HSP 2 Score: 22.7126 bits (47), Expect = 1.638e-70
Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 2
Query:  749 FLFFSRQIETAGTEGGELD 805
            F     ++ETA  EGGELD
Sbjct:  932 FASLLEKLETARPEGGELD 950          
BLAST of EY692540 vs. ExPASy Swiss-Prot
Match: PWD_ORYSJ (Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 2.753e-64
Identity = 140/258 (54.26%), Postives = 175/258 (67.83%), Query Frame = 3
Query:   18 KLCTLLLKAVRSTLGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASSTCVNLNPYITHGNDGNFGLK-TLXXXXXXTVLDRGVHVSSFSASKAPMLSQGVSTGV------ILLADADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVXIPFGSMQLALEQSKCMDTFCSFLDK 770
            KLCT+L KA+R  LGS GWDVLVPG A G L++V+RI PGSL SS  EPV+L V KADGDEEV AAG NI+GVILLQELPHLSHLGVRARQE VVFVTCE D+ V+D+  L GKY+RLEASS  VNL+  ++  ND     +           L     + S       M  Q   +GV      + L++A   ++GAKAAAC  L+ L+++S KVYSDQGVPA+F VP+G  IPFGSM+ AL++S  +++F S L+K
Sbjct:  693 KLCTVLQKAIREVLGSTGWDVLVPGVAHGTLMRVERILPGSLPSSVKEPVVLIVDKADGDEEVKAAGDNIVGVILLQELPHLSHLGVRARQENVVFVTCEYDDTVTDVYLLEGKYIRLEASSINVNLS-IVSEKNDNAVSTEPNSTGNPFQQKLQNEFSLPSDIEMPLQMSKQKSKSGVNGSFAALELSEASVESAGAKAAACRTLSVLASLSNKVYSDQGVPAAFRVPSGAVIPFGSMEDALKKSGSLESFTSLLEK 949          

HSP 2 Score: 21.9422 bits (45), Expect = 2.753e-64
Identity = 13/32 (40.62%), Postives = 17/32 (53.12%), Query Frame = 2
Query:  749 FLFFSRQIETAGTEGGELDIFAVTSELNLLFS 844
            F     +IETA  E GE+D  A+  EL  + S
Sbjct:  943 FTSLLEKIETAKVENGEVDSLAL--ELQAIIS 972          
The following BLAST results are available for this feature:
BLAST of EY692540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PWD_ARATH1.638e-7055.89Phosphoglucan, water dikinase, chloroplastic OS=Ar... [more]
PWD_ORYSJ2.753e-6454.26Phosphoglucan, water dikinase, chloroplastic OS=Or... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-G04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692540 ID=EY692540; Name=EY692540; organism=Citrus sinensis; type=EST; length=932bp
CCACGCGTCCGGGTTTCAAGCTTTGTACTCTTCTTCTGAAAGCTGTTAGA
AGCACACTTGGCTCTCAGGGTTGGGATGTTCTTGTTCCAGGAGCTGCTGT
TGGAAAGTTGGTTCAGGTTGACAGAATTAGTCCTGGATCATTGTCGTCGT
CTGGAGATGAACCTGTTATTCTTGCTGTTAGCAAGGCAGATGGAGATGAA
GAGGTCGCAGCTGCTGGGAGTAACATATTGGGAGTTATACTTCTGCAAGA
GCTGCCTCACTTATCTCACCTTGGTGTTAGGGCCCGGCAGGAGAAGGTTG
TCTTTGTGACGTGTGAAGACGATGAAAAAGTGTCTGATATAGAAAGACTT
GCTGGAAAATACGTGAGATTAGAAGCCTCCTCAACATGTGTGAACCTAAA
TCCATATATTACACATGGAAATGATGGCAATTTTGGTTTGAAAACTCTTT
CTGGTAGCAGTTCATCAACTGTTCTAGATCGTGGAGTTCATGTCTCATCC
TTCTCTGCTTCAAAAGCCCCTATGTTGAGTCAGGGTGTTTCCACTGGAGT
TATACTGCTTGCAGATGCAGATGCAATGACTTCAGGTGCAAAGGCTGCAG
CTTGTGGTCGTTTAGCTTCTTTATCAGCAGTTTCTGAAAAGGTGTACAGC
GACCAAGGGGTGCCGGCTTCTTTTCTTGTACCTGCAGGAGTTNGTATACC
TTTTGGTTCCATGCAGTTGGCTCTGGAGCAAAGCAAATGCATGGATACTT
TTTGTTCTTTTCTAGACAAATAGAAACAGCTGGGACAGAGGGTGGTGAGC
TTGATATCTTTGCTGTCACTTCAGAGCTGAATCTGCTCTTCAGCTTCAGA
GACTTATGAAAGCATAGAAGATATTCCGCCAAGCGCATTGATGTCGTTCA
GTGCAATGTTAGACTTGCTGAATGCACTGCAG
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