EY692538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: RL18A_CASSA (60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1) HSP 1 Score: 334.339 bits (856), Expect = 5.798e-91 Identity = 160/178 (89.89%), Postives = 166/178 (93.26%), Query Frame = 2 Query: 143 MVTFRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLFM 676 MVTFRFHQYQVVGR LP+E DEHPKIYRMKLWATNEVRAKSKFWY LRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRD TLNGAVEQMY EMASRHRVR PCIQII+TATIPAKLCKRES+KQFHNS IKFPLV +K+ PP +LKT YKASRPNLFM Sbjct: 1 MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: R18A2_ARATH (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB PE=1 SV=2) HSP 1 Score: 331.643 bits (849), Expect = 3.758e-90 Identity = 158/178 (88.76%), Postives = 166/178 (93.26%), Query Frame = 2 Query: 143 MVTFRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLFM 676 M FRFHQYQVVGRALPTEKD PKIYRMKLWATNEVRAKSKFWY LRKLKKVKKSNGQMLAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRD TLNGAVEQMYTEMASRHRVR PCIQII+TAT+PAKLCKRESTKQFHNS IKFPLVF+KV PP +LKTTYKA++PNLFM Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: R18A3_ARATH (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC PE=2 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 9.256e-89 Identity = 155/175 (88.57%), Postives = 161/175 (92.00%), Query Frame = 2 Query: 152 FRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLFM 676 FRFHQYQVVGRALPTE DEHPKIYRMKLW NEV AKSKFWY +RKLKKVKKSNGQMLAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRD TLNG VEQMYTEMASRHRVR PCIQII+TAT+PAKLCKRE TKQFHNS IKFPLVF+KV PP +LKTTYKAS+PNLFM Sbjct: 4 FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: RL18A_ORYSJ (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 5.079e-87 Identity = 153/178 (85.96%), Postives = 162/178 (91.01%), Query Frame = 2 Query: 143 MVTFRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLFM 676 M FRFHQYQVVGR LPT DEHPKIYRMKLWATNEVRAKSKFWY LRKLKKVKKSNGQ+LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRD TLNGAVEQMYTEMASRHRVR PCIQII+TAT+ KLCKR++TKQFH S IKFPLV++KV PP +LKTT+KASRPNLFM Sbjct: 1 MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: RL18A_DICDI (60S ribosomal protein L18a OS=Dictyostelium discoideum GN=rpl18a PE=3 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 9.364e-49 Identity = 93/171 (54.39%), Postives = 123/171 (71.93%), Query Frame = 2 Query: 161 HQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLF 673 H++QVVGR +PTE+D +PKIYRM+L+A + AKS+FWY L K+ K+KKS G++L + EIFE P K+KN+G+++RY SR+G HN+YKEYRD+T GAV QMY EMASRH R I II I A L +R +TKQFH+S IKFPL + + K+T+ A+RPN F Sbjct: 4 HEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNVTEIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIHIIDIKEIAASLTRRANTKQFHDSKIKFPLTHRIA-----KSKSTFVANRPNTF 169
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: RL18A_SPOFR (60S ribosomal protein L18a OS=Spodoptera frugiperda GN=RpL18A PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.145e-46 Identity = 85/172 (49.42%), Postives = 126/172 (73.26%), Query Frame = 2 Query: 164 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLFMV 679 +Y+V+GR LP+E + P +Y+M++++ +++ AKS+FWY LR+LKK KK+ G++++I EI EK+P KIKN+GIWLRY+SR+G HNMY+EYRD+++ GAV Q Y +M +RHR R+ IQII+ I A C+R KQFHNS I+FPL K+V H + T+ RP+ + + Sbjct: 9 EYEVIGRKLPSESEPKPPLYKMRIFSPDQIVAKSRFWYFLRQLKKFKKTTGEIVSIREIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKASACRRPQVKQFHNSTIRFPLP-KRVH--HHKRLNTFAYKRPSTYFL 177
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: RL18A_HUMAN (60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 2.550e-46 Identity = 86/170 (50.59%), Postives = 120/170 (70.59%), Query Frame = 2 Query: 164 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLF 673 +Y+VVGR LPT K P +YRM+++A N V AKS+FWY + +LKK+KKS+G+++ ++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD+T GAV Q Y +M +RHR R+ IQI++ I A C+R + KQFH+S IKFPL + + H K + RPN F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQH---KPRFTTKRPNTF 175
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: RL18A_BOVIN (60S ribosomal protein L18a OS=Bos taurus GN=RPL18A PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.550e-46 Identity = 86/170 (50.59%), Postives = 120/170 (70.59%), Query Frame = 2 Query: 164 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLF 673 +Y+VVGR LPT K P +YRM+++A N V AKS+FWY + +LKK+KKS+G+++ ++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD+T GAV Q Y +M +RHR R+ IQI++ I A C+R + KQFH+S IKFPL + + H K + RPN F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQH---KPRFTTKRPNTF 175
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: RL18A_RAT (60S ribosomal protein L18a OS=Rattus norvegicus GN=Rpl18a PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 4.350e-46 Identity = 86/170 (50.59%), Postives = 120/170 (70.59%), Query Frame = 2 Query: 164 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLF 673 +Y+VVGR LPT K P +YRM+++A N V AKS+FWY + +LKK+KKS+G+++ ++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD+T GAV Q Y +M +RHR R+ IQI++ I A C+R + KQFH+S IKFPL + + H K + RPN F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLRRQH---KPRFTTKRPNTF 175
BLAST of EY692538 vs. ExPASy Swiss-Prot
Match: RL18A_MOUSE (60S ribosomal protein L18a OS=Mus musculus GN=Rpl18a PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 4.350e-46 Identity = 86/170 (50.59%), Postives = 120/170 (70.59%), Query Frame = 2 Query: 164 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYILRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSXIKFPLVFKKVXPPHEELKTTYKASRPNLF 673 +Y+VVGR LPT K P +YRM+++A N V AKS+FWY + +LKK+KKS+G+++ ++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD+T GAV Q Y +M +RHR R+ IQI++ I A C+R + KQFH+S IKFPL + + H K + RPN F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLRRQH---KPRFTTKRPNTF 175 The following BLAST results are available for this feature:
BLAST of EY692538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692538 ID=EY692538; Name=EY692538; organism=Citrus sinensis; type=EST; length=927bpback to top |