EY692535

Overview
NameEY692535
Unique NameEY692535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10915 contig Csv1_Contig10915:2..935. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.123e-33
Identity = 77/140 (55.00%), Postives = 98/140 (70.00%), Query Frame = 2
Query:  482 RSMVSFEDVHLANGSNNRPFFRPFDRDENGDEDL--DEYFHQ--PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKLKAXGLTLT 889
            RSM++ E+      S  RPFF       +  EDL  D+++    PEKKRRLT +QV  LEKSFE ENKLEPERK QLAK LGLQPRQVA+WFQNRRARWKTKQLE+DYD+L+++Y+ L   Y  +  + +KL++   +LT
Sbjct:   34 RSMMNMEET-----SKRRPFF-------SSPEDLYDDDFYDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLT 161          
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 3.381e-30
Identity = 67/118 (56.78%), Postives = 84/118 (71.19%), Query Frame = 2
Query:  521 GSNNRPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKL 865
            GSN +     +D D    E+     H     EKKRRL VDQV+ LEK+FE+ENKLEPERK +LA++LGLQPRQVA+WFQNRRARWKTKQLEKDY VL+  Y+SL+  +  L ++ + L
Sbjct:   27 GSNYQSMLEGYDEDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSL 144          
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30
Identity = 68/122 (55.74%), Postives = 89/122 (72.95%), Query Frame = 2
Query:  533 RPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKLKAXGLTLT 889
            RPFF         DE L+E ++    PEKKRRLT +QV  LE+SFE ENKLEPERK +LA+ LGLQPRQVA+WFQNRRARWKTKQLE+D+D L+ S+++L+  +  L Q+  +L +  ++LT
Sbjct:   55 RPFFT------TPDELLEEEYYDEQLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT 170          
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30
Identity = 68/122 (55.74%), Postives = 89/122 (72.95%), Query Frame = 2
Query:  533 RPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKLKAXGLTLT 889
            RPFF         DE L+E ++    PEKKRRLT +QV  LE+SFE ENKLEPERK +LA+ LGLQPRQVA+WFQNRRARWKTKQLE+D+D L+ S+++L+  +  L Q+  +L +  ++LT
Sbjct:   57 RPFFT------TPDELLEEEYYDEQLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT 172          
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.862e-29
Identity = 62/89 (69.66%), Postives = 78/89 (87.64%), Query Frame = 2
Query:  605 EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKLKA 871
            EKKRRL+V+QV+ LE+SFEVENKLEPERK +LA+DLGLQPRQVA+WFQNRRARWKTKQLE+DY  L++SY+SL+  +  L ++K+ L A
Sbjct:   50 EKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLA 138          
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.862e-29
Identity = 62/89 (69.66%), Postives = 78/89 (87.64%), Query Frame = 2
Query:  605 EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKLKA 871
            EKKRRL+V+QV+ LE+SFEVENKLEPERK +LA+DLGLQPRQVA+WFQNRRARWKTKQLE+DY  L++SY+SL+  +  L ++K+ L A
Sbjct:   50 EKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLA 138          
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.738e-29
Identity = 67/128 (52.34%), Postives = 89/128 (69.53%), Query Frame = 2
Query:  515 ANGSNNRPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKLKAXGLTLT 889
            A     RPFF   +      E L+E ++    PEKKRRLT +QVQ LE+SFE ENKLEPERK +LA+ LG+ PRQVA+WFQNRRARWKTKQLE D+D L+ +Y++L   +  L  + ++L+A  ++LT
Sbjct:   58 AGAGAKRPFFTTHE------ELLEEEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLT 179          
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.738e-29
Identity = 67/128 (52.34%), Postives = 89/128 (69.53%), Query Frame = 2
Query:  515 ANGSNNRPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKLKAXGLTLT 889
            A     RPFF   +      E L+E ++    PEKKRRLT +QVQ LE+SFE ENKLEPERK +LA+ LG+ PRQVA+WFQNRRARWKTKQLE D+D L+ +Y++L   +  L  + ++L+A  ++LT
Sbjct:   58 AGAGAKRPFFTTHE------ELLEEEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLT 179          
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.882e-29
Identity = 59/87 (67.82%), Postives = 76/87 (87.36%), Query Frame = 2
Query:  605 EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKL 865
            EKKRRL+++QV+ LEK+FE+ENKLEPERK++LA++LGLQPRQVA+WFQNRRARWKTKQLEKDY VL+  Y+SL+  +  L ++ E L
Sbjct:   61 EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESL 147          
BLAST of EY692535 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 8.328e-29
Identity = 64/103 (62.14%), Postives = 80/103 (77.67%), Query Frame = 2
Query:  566 NGDEDL-DEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKXRYXHLFQEKEKLKA 871
            NG+ED  D+     EKKRRL ++QV+ LEK+FE+ NKLEPERK+QLA+ LGLQPRQ+AIWFQNRRARWKTKQLEKDYD L+  +++LK     L    +KL+A
Sbjct:   70 NGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQA 172          
The following BLAST results are available for this feature:
BLAST of EY692535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
HAT5_ARATH1.123e-3355.00Homeobox-leucine zipper protein HAT5 OS=Arabidopsi... [more]
ATB16_ARATH3.381e-3056.78Homeobox-leucine zipper protein ATHB-16 OS=Arabido... [more]
HOX16_ORYSJ7.532e-3055.74Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX16_ORYSI7.532e-3055.74Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX4_ORYSJ2.862e-2969.66Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX4_ORYSI2.862e-2969.66Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX5_ORYSJ3.738e-2952.34Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]
HOX5_ORYSI3.738e-2952.34Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]
ATHB6_ARATH4.882e-2967.82Homeobox-leucine zipper protein ATHB-6 OS=Arabidop... [more]
ATB13_ARATH8.328e-2962.14Homeobox-leucine zipper protein ATHB-13 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-F11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692535 ID=EY692535; Name=EY692535; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGAAAATAGGGGAATAAACTCTCTTCATATCCACTTCCACT
TCCTCTTCCTCTTCTTCTTGTCCGCTTTGCTTCTCCAAACTTCAAACTTC
ACACTTCTCCTGAAACCTCTCACGAAACACTCTTTCAAATCCTTATATTC
TGAGTGATGGGTATGAGCAGCCGCTGCTCCCACACATCTCACATAACCGA
GATCATAATCACCAGCTTCTTTCGTCATAAGTCTTAAATTAAATTTCTTC
TCGACTGTTGAATCATCGCATCATCTTTAGCGATGGCTGCTTAAAAGATT
AAGAATATTAGTTTTAAGTTAAATGGCGGGTGGGAGGATGTATAATCAAA
ATAGTTCTAGTGGTGGTGGTACTTCAAGTCTGTCCTTTCTGATTCAAAGC
CAAAAGGGTTCTTGCTCTAACTCTCAGAATCTTGATGCTTCGTTCCTCTC
TGGCCCTTCTCCTTCTCCTTTTCTTGGACCAAGATCCATGGTGAGCTTTG
AAGATGTGCACTTAGCAAATGGATCCAATAACAGGCCATTTTTCCGCCCA
TTTGATCGTGATGAAAATGGGGATGAGGACTTGGATGAGTACTTTCATCA
ACCTGAAAAGAAAAGACGGCTCACGGTTGATCAAGTCCAGTTTCTTGAAA
AAAGCTTCGAGGTAGAGAACAAGCTTGAACCCGAAAGGAAAATTCAACTG
GCAAAAGACCTTGGCTTGCAGCCTAGACAGGTTGCGATTTGGTTCCAAAA
CCGCCGGGCTCGTTGGAAGACTAAACAGCTCGAGAAGGATTACGATGTAT
TGCAAAACAGCTATAATAGCCTTAAGGNNCGATATGANCATCTCTTTCAA
GAGAAAGAAAAGCTAAAAGCTGANGGTCTTACGCTCACGACAAGCTGCAG
GTCAAAGAGAAAGAGGTAAAAACACAGAATTGC
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