EY692528

Overview
NameEY692528
Unique NameEY692528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692528 vs. ExPASy Swiss-Prot
Match: FB118_ARATH (F-box protein At2g26850 OS=Arabidopsis thaliana GN=At2g26850 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.630e-55
Identity = 97/146 (66.44%), Postives = 114/146 (78.08%), Query Frame = 2
Query:   14 YSPHGRRM--VEENISWERLRAPAVDTPSHVLHNSDCLHDLKPGDHIEIQWRRNKEFPYGWWYGVVGHLESCGRNEHHCLCLYKDTVVLEFNQYPTGSRWRQTMINRKDHREVGNEADGFYGGIRKIYKEEEISMWKSLWPRHALE 445
            Y PHG+R   VE++++WER+RA  VD   H L+ SD L++LKPGDHIEIQWRRNKEFPYGWWY VVGH+ESC  N +HC C   + +VLEFNQY  GSRWR+TMINR+DHRE GNE DGFYGGIRKI  +E+I MWK LWP   LE
Sbjct:  226 YPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLNELKPGDHIEIQWRRNKEFPYGWWYSVVGHMESCDGNLNHCQCHNSEMMVLEFNQYTVGSRWRKTMINRRDHREKGNEEDGFYGGIRKINCKEDIEMWKRLWPSSILE 371          
BLAST of EY692528 vs. ExPASy Swiss-Prot
Match: FB121_ARATH (F-box protein At2g32560 OS=Arabidopsis thaliana GN=At2g32560 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.574e-53
Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 2
Query:   14 YSPHGRRM--VEENISWERLRAPAVDTPSHVLHNSDCLHDLKPGDHIEIQWRRNKEFPYGWWYGVVGHLESCGRNEHHCLCLYKDTVVLEFNQYPTGSRWRQTMINRKDHREVGNEADGFYGGIRKIYKEEEISMWKSLWPRHALE 445
            Y PHGRR   +E+ ++W+R+RA  +D   H+LH SD L +LKPGDHIEIQWRRNKEFPYGWWYG+V HLESC  + +HC C   +TVVLEFNQY  GSRWR+TMI R DH+E GNE DGFYGGIRK+  +EEI+MWK  WP   LE
Sbjct:  227 YPPHGRRASAIEKGVTWDRIRAAPIDASPHLLHVSDSLKELKPGDHIEIQWRRNKEFPYGWWYGLVRHLESCDGDHNHCHCHLSETVVLEFNQYTVGSRWRRTMIMR-DHKEEGNEEDGFYGGIRKLNCKEEIAMWKRHWPCSILE 371          
BLAST of EY692528 vs. ExPASy Swiss-Prot
Match: FB132_ARATH (F-box protein At2g41170 OS=Arabidopsis thaliana GN=At2g41170 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.001e-50
Identity = 87/144 (60.42%), Postives = 105/144 (72.92%), Query Frame = 2
Query:   14 YSPHGRRMVEENISWERLRAPAVDTPSHVLHNSDCLHDLKPGDHIEIQWRRNKEFPYGWWYGVVGHLESCGRNEHHCLCLYKDTVVLEFNQYPTGSRWRQTMINRKDHREVGNEADGFYGGIRKIYKEEEISMWKSLWPRHALE 445
            YS HGRR  EE ++W+RLR    DT S  LH SDCLH L+PGDH EIQWRR KEFPYGWW+G+VGHL++C     +C C   + VV+EF Q+   S WR+T+I RKDHRE GNE +GFYGG++K+  EEEIS WK LWP  ALE
Sbjct:  229 YSAHGRRAAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHFEIQWRRTKEFPYGWWFGIVGHLQNCD-GVQNCRCDSDENVVMEFRQFRPESPWRRTVIKRKDHRETGNEENGFYGGVKKLGTEEEISTWKQLWPSQALE 371          
The following BLAST results are available for this feature:
BLAST of EY692528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
FB118_ARATH1.630e-5566.44F-box protein At2g26850 OS=Arabidopsis thaliana GN... [more]
FB121_ARATH7.574e-5364.38F-box protein At2g32560 OS=Arabidopsis thaliana GN... [more]
FB132_ARATH6.001e-5060.42F-box protein At2g41170 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-F04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692528 ID=EY692528; Name=EY692528; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGGTACTCACCCCACGGACGACGAATGGTAGAGGAAAATA
TATCCTGGGAGAGGCTGAGAGCACCAGCAGTTGATACTCCTTCACATGTT
CTTCACAACTCAGATTGTTTACATGACTTAAAGCCTGGTGACCACATTGA
GATCCAGTGGAGAAGAAACAAAGAATTTCCTTATGGTTGGTGGTATGGTG
TTGTTGGGCACTTGGAATCATGTGGTAGAAATGAACATCACTGCCTTTGC
CTCTATAAGGATACGGTGGTTTTGGAGTTTAACCAGTACCCGACTGGCTC
AAGATGGAGGCAAACGATGATTAACAGGAAGGATCATCGGGAAGTAGGCA
ATGAAGCTGATGGATTTTATGGAGGAATCAGAAAGATTTACAAAGAGGAG
GAGATATCAATGTGGAAGAGCCTGTGGCCAAGACATGCCTTGGAATAGTA
CGATGAATGGCTTTTGACTCTGTACATACACAATCCCTCTCTTTTTTTCC
CCTCTTGAACTGTGAATTATAAAGCATTAAATTCATAGGAGAAGTTCGAA
GAAGATCATAGAGTACATTAAATTATTTTAGCCCTTCACTAAGAGGCCGT
GACCCGTGAAAGAGTAAAACTTGGATGTACCTTCTGCACCAAGATATGGA
ATGAAAATTATTGNTAGTAGTTGTACTATCTGAAGCTGGATGGTTTTTTC
AGCTTCNAATTNGAAAANANNNNNNNNNNNNNNAAANAANNANNANAAAN
AAANAAAAAAAAAAAGGGAGCCGCTCAAAAGAACCAAGCTTCTTCCCGTG
GTTGGCGCTCTTANTCTTTAAAGAGGGGCGCGATTCAATAGATGGGCCTT
TTTTACCGGGGGGGAGGGGAAAACCCT
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