EY692526

Overview
NameEY692526
Unique NameEY692526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9226 contig Csv1_Contig9226:1..904. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.810e-97
Identity = 177/202 (87.62%), Postives = 186/202 (92.08%), Query Frame = 2 
Query:  131 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDPAFTFSETVQTAISTL 736
            MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD TSV+HLFPITKYLGLLATGMTADARTLVQQAR EAAEFRFKYGYEMPVDVL+KWIADKSQVYTQHAYMRPLGVVAM+L IDEE GP+   CDPAGHFFGH ATSAG +  EA  FL K+MKNDPAF++ ETVQTAIS L
Sbjct:    1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISAL 202
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2)

HSP 1 Score: 352.443 bits (903), Expect = 2.001e-96
Identity = 174/202 (86.14%), Postives = 185/202 (91.58%), Query Frame = 2 
Query:  131 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDPAFTFSETVQTAISTL 736
            MSRGSGGGY+RHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDS+CVVT KKVPDKLLD+TSVTHLFPITKYLGLLATGMTADARTLVQQAR EAAEFRF YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL ID+E GP+   CDPAGH+FGH ATSAG +  EA  FL K+MKNDP+FT+ ETVQTAIS L
Sbjct:    1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISAL 202
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.586e-93
Identity = 169/202 (83.66%), Postives = 182/202 (90.10%), Query Frame = 2 
Query:  131 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDPAFTFSETVQTAISTL 736
            MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD +SV+HLFP+TKYLGLLATGMTAD+R+LVQQAR EAAEFRF+YGYEMP D+LAKWIADKSQVYTQHAYMRPLGVVAMVL IDEE GP    CDPAGHF+GH ATSAG +  EA  FL K+MK +PAFT+ ETVQTAIS L
Sbjct:    1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISAL 202
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.753e-92
Identity = 166/202 (82.18%), Postives = 181/202 (89.60%), Query Frame = 2 
Query:  131 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDPAFTFSETVQTAISTL 736
            MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK AG+TSIGVRGKDSVCVVTQKKVPDKLLD +SVTHLFPITKY+GL+ATG+TADAR+LVQQAR +AAEFRF YGYEMPVD+LAKWIADKSQVYTQHAYMRPLGVVAMV+ +DEE GP    CDPAGHF+GH ATSAG +  EA  FL K+MK +P+FTF ETVQTAIS L
Sbjct:    1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISAL 202
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 3.306e-91
Identity = 166/202 (82.18%), Postives = 180/202 (89.11%), Query Frame = 2 
Query:  131 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDPAFTFSETVQTAISTL 736
            MSRG+G GYDRHITIFSPEGRL+QVEYAFKAVK+AGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKY+GLLATG+TADAR+LV QAR EAAEFRFK+GYEMPVDVLAKWIADK+QVYTQHAYMRPLGVVAMVL  DEE   +   CDPAGHFFGH ATSAG +  EA  FL K+MK+DP F++ ETVQ AIS L
Sbjct:    1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISAL 202
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.158e-66
Identity = 124/202 (61.39%), Postives = 159/202 (78.71%), Query Frame = 2 
Query:  131 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDPAFTFSETVQTAISTL 736
            MSRGS  G+DRHITIFSPEGRL+QVEYAFKA+   G+TS+ VRGKD   +VTQKKVPDKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG   +++ IDEE GP+   CDPAG++ G  AT+AG +  E+  FL K++K    +TF +TV+TAI+ L
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6_MOUSE (Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.158e-66
Identity = 124/202 (61.39%), Postives = 159/202 (78.71%), Query Frame = 2 
Query:  131 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDPAFTFSETVQTAISTL 736
            MSRGS  G+DRHITIFSPEGRL+QVEYAFKA+   G+TS+ VRGKD   +VTQKKVPDKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG   +++ IDEE GP+   CDPAG++ G  AT+AG +  E+  FL K++K    +TF +TV+TAI+ L
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6_HUMAN (Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.158e-66
Identity = 124/202 (61.39%), Postives = 159/202 (78.71%), Query Frame = 2 
Query:  131 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDPAFTFSETVQTAISTL 736
            MSRGS  G+DRHITIFSPEGRL+QVEYAFKA+   G+TS+ VRGKD   +VTQKKVPDKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG   +++ IDEE GP+   CDPAG++ G  AT+AG +  E+  FL K++K    +TF +TV+TAI+ L
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6_BOVIN (Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.158e-66
Identity = 124/202 (61.39%), Postives = 159/202 (78.71%), Query Frame = 2 
Query:  131 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDPAFTFSETVQTAISTL 736
            MSRGS  G+DRHITIFSPEGRL+QVEYAFKA+   G+TS+ VRGKD   +VTQKKVPDKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG   +++ IDEE GP+   CDPAG++ G  AT+AG +  E+  FL K++K    +TF +TV+TAI+ L
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
[Close]
BLAST of EY692526 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.736e-53
Identity = 108/199 (54.27%), Postives = 139/199 (69.85%), Query Frame = 2 
Query:  152 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRXS*CDPAGHFFGHXATSAGFEGAEAXXFLXKEMKNDP-AFTFSETVQTAISTLHQS 745
            G+DR IT+FSPEGRL+QVEYAFKA   AG+TS+GV GK+  CV++QKKVPDKL+D ++V H+FPITK +G + TG  ADAR  V +AR EAAEF +K GY MP DVLAK +A+ +QV TQ A MRPLGV   ++++D+E GP     DPAG + G+ ATSAG +  E   +L K  K D      ++TV+T I  L  S
Sbjct:    6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQALMSS 204
The following BLAST results are available for this feature:
BLAST of EY692526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
PSA6_TOBAC1.810e-9787.62Proteasome subunit alpha type-6 OS=Nicotiana tabac... [more]
PSA6_SOYBN2.001e-9686.14Proteasome subunit alpha type-6 OS=Glycine max GN=... [more]
PSA6B_ARATH1.586e-9383.66Proteasome subunit alpha type-6-B OS=Arabidopsis t... [more]
PSA6A_ARATH1.753e-9282.18Proteasome subunit alpha type-6-A OS=Arabidopsis t... [more]
PSA6_ORYSJ3.306e-9182.18Proteasome subunit alpha type-6 OS=Oryza sativa su... [more]
PSA6_RAT2.158e-6661.39Proteasome subunit alpha type-6 OS=Rattus norvegic... [more]
PSA6_MOUSE2.158e-6661.39Proteasome subunit alpha type-6 OS=Mus musculus GN... [more]
PSA6_HUMAN2.158e-6661.39Proteasome subunit alpha type-6 OS=Homo sapiens GN... [more]
PSA6_BOVIN2.158e-6661.39Proteasome subunit alpha type-6 OS=Bos taurus GN=P... [more]
PSA6_SCHPO2.736e-5354.27Probable proteasome subunit alpha type-6 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-F02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692526 ID=EY692526; Name=EY692526; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGGTTTGGTCGTATTTCATTCATACATATAATTACTGTACG
AAGTGCGGATTGATCCGACAAGTAGAACTGCGTGAAGAAGAAAATTGAAA
GAGAGGAATCACTGTAGCGTATAATCAACAATGAGTAGAGGAAGTGGAGG
AGGATACGATCGTCATATTACAATTTTTTCGCCTGAGGGTCGTCTCTTTC
AAGTCGAGTATGCTTTCAAAGCTGTTAAGGCTGCTGGGGTTACCTCTATT
GGTGTTCGAGGAAAGGATTCAGTCTGTGTTGTGACTCAGAAGAAGGTCCC
GGACAAGCTTTTGGATCATACAAGTGTCACACATCTTTTCCCAATCACAA
AGTACCTTGGATTGCTGGCAACTGGAATGACAGCTGATGCAAGGACATTG
GTTCAGCAGGCAAGATATGAAGCCGCTGAGTTTCGCTTCAAATATGGATA
TGAAATGCCTGTGGATGTGTTAGCCAAATGGATTGCAGACAAATCACAAG
TATATACTCAACATGCTTATATGAGACCACTTGGTGTAGTTGCTATGGTT
TTGAGTATTGACGAAGAATGTGGACCTCGCCNNTCTTAGTGTGACCCTGC
TGGCCATTTCTTTGGCCACNAGGCAACAAGTGCTGGATTTGAAGGAGCAG
AGGCATTNNATTTCTTGNAGAAAGAGATGAAGAATGATCCTGCGTTTACC
TTTTCAGAAACTGTGCAGACTGCAATTTCCACCCTGCATCAGTCCTGCAA
GAGGATTTTAAGCNANTGAAATTGAGGNTGGCGTGGTGAGCAAGGAGATC
CAGAATCNGAGTTTTGTCCATCCAGGAGATCGATGAACACTGACTGCTTT
AAGTGACCAGATTAGGAGGTGGTTCATGCCCAGCCCAAATGCTGAACCAA
AAAA
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