EY692523

Overview
NameEY692523
Unique NameEY692523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692523 vs. ExPASy Swiss-Prot
Match: WDR44_BOVIN (WD repeat-containing protein 44 OS=Bos taurus GN=WDR44 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.358e-13
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 3 
Query:   15 VRSYKGSCHLYNTSENKLQQKSPINLQNKKKRSHQ-RKITGFQFAPGSSSEVLVTSADSRIRVVD--GIDLVHKFKGFRNTNSQISASLTANGRYVVSASEDSYVYVW 329
            + +Y G C  Y+T    L+  + I++++ + R+   RKITG +  PG + ++LVTS DSRIR+ D   + L  K+KG+ N++SQI AS + +  Y+VS SED YVY+W
Sbjct:  708 IGTYDGRCIFYDTEH--LKYHTQIHVRSTRGRNKVGRKITGIEPLPGEN-KILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFNYLVSGSEDKYVYIW 812
[Close]
BLAST of EY692523 vs. ExPASy Swiss-Prot
Match: WDR44_RAT (WD repeat-containing protein 44 OS=Rattus norvegicus GN=Wdr44 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.773e-13
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 3 
Query:   15 VRSYKGSCHLYNTSENKLQQKSPINLQNKKKRSHQ-RKITGFQFAPGSSSEVLVTSADSRIRVVD--GIDLVHKFKGFRNTNSQISASLTANGRYVVSASEDSYVYVW 329
            + +Y G C  Y+T    L+  + I++++ + R+   RKITG +  PG + ++LVTS DSRIR+ D   + L  K+KG+ N++SQI AS + +  Y+VS SED YVY+W
Sbjct:  704 IGTYDGRCIFYDTEH--LKYHTQIHVRSTRGRNKVGRKITGIEPLPGEN-KILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIW 808
[Close]
BLAST of EY692523 vs. ExPASy Swiss-Prot
Match: WDR44_MOUSE (WD repeat-containing protein 44 OS=Mus musculus GN=Wdr44 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.773e-13
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 3 
Query:   15 VRSYKGSCHLYNTSENKLQQKSPINLQNKKKRSHQ-RKITGFQFAPGSSSEVLVTSADSRIRVVD--GIDLVHKFKGFRNTNSQISASLTANGRYVVSASEDSYVYVW 329
            + +Y G C  Y+T    L+  + I++++ + R+   RKITG +  PG + ++LVTS DSRIR+ D   + L  K+KG+ N++SQI AS + +  Y+VS SED YVY+W
Sbjct:  711 IGTYDGRCIFYDTEH--LKYHTQIHVRSTRGRNKVGRKITGIEPLPGEN-KILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIW 815
[Close]
BLAST of EY692523 vs. ExPASy Swiss-Prot
Match: WDR44_HUMAN (WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.773e-13
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 3 
Query:   15 VRSYKGSCHLYNTSENKLQQKSPINLQNKKKRSHQ-RKITGFQFAPGSSSEVLVTSADSRIRVVD--GIDLVHKFKGFRNTNSQISASLTANGRYVVSASEDSYVYVW 329
            + +Y G C  Y+T    L+  + I++++ + R+   RKITG +  PG + ++LVTS DSRIR+ D   + L  K+KG+ N++SQI AS + +  Y+VS SED YVY+W
Sbjct:  709 IGTYDGRCIFYDTEH--LKYHTQIHVRSTRGRNKVGRKITGIEPLPGEN-KILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIW 813
[Close]
BLAST of EY692523 vs. ExPASy Swiss-Prot
Match: WDR44_XENLA (WD repeat-containing protein 44 OS=Xenopus laevis GN=wdr44 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.024e-13
Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 3 
Query:   15 VRSYKGSCHLYNTSENKLQQKSPINLQNKKKRSHQ-RKITGFQFAPGSSSEVLVTSADSRIRVVD--GIDLVHKFKGFRNTNSQISASLTANGRYVVSASEDSYVYVW 329
            + +Y G C  Y+T    L+  + I++++ + R+   RKITG +  PG + ++LVTS DSRIR+ D   + L  K+KG  N++SQI AS + +  Y+VS SED YVY+W
Sbjct:  712 IGTYDGRCIFYDTEH--LKYHTQIHVRSTRGRNRVGRKITGIEPLPGEN-KILVTSNDSRIRLYDLRDLSLSMKYKGCVNSSSQIKASFSHDFTYIVSGSEDKYVYIW 816
The following BLAST results are available for this feature:
BLAST of EY692523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
WDR44_BOVIN1.358e-1341.67WD repeat-containing protein 44 OS=Bos taurus GN=W... [more]
WDR44_RAT1.773e-1341.67WD repeat-containing protein 44 OS=Rattus norvegic... [more]
WDR44_MOUSE1.773e-1341.67WD repeat-containing protein 44 OS=Mus musculus GN... [more]
WDR44_HUMAN1.773e-1341.67WD repeat-containing protein 44 OS=Homo sapiens GN... [more]
WDR44_XENLA3.024e-1341.67WD repeat-containing protein 44 OS=Xenopus laevis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-E11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692523 ID=EY692523; Name=EY692523; organism=Citrus sinensis; type=EST; length=962bp
TGCTCGACCCACGCGTCCGGTCTTACAAGGGAAGCTGTCATTTATACAAT
ACATCTGAGAATAAGTTGCAACAGAAGAGTCCAATCAACCTGCAGAATAA
GAAGAAGAGATCTCATCAGAGGAAAATCACTGGTTTCCAGTTTGCACCAG
GAAGTTCATCAGAAGTGCTCGTCACGTCTGCAGATTCAAGGATTCGAGTT
GTTGATGGCATTGACTTGGTTCACAAGTTCAAAGGTTTTCGTAACACAAA
TAGCCAAATCTCAGCTTCACTCACAGCAAATGGAAGATATGTGGTCTCTG
CTAGTGAGGATTCTTATGTTTATGTATGGAAATACGAAGCTGAATCCCGA
CCTAGCAGAAGCAAAAGTATTACTGTTACGCATTCATATGAGCATTTCCA
TTGTCAAGATGTTTCAGTGGCCATCCCTTGGCCTGGTGTGGGTGACACTT
GGGGGCTGCAAGATACATATCTTGATGAGTTTTCCACCGCAAACCATCCT
CCTACACCTGTTGAGGAAATTAGTGGTAATGAGGATTGTCGATCTGCAAC
TGGTTACACCAATAGTCCGCTAAATGGAACCATTTCTAGTGCAACCAACA
GCTATTTCTTTGATAGAATCTCAGCTACATGGCCAGAGGAAAAACTTGTC
TTGACTGCTANGAATCGGAGCCCTCGAACCAGCTTGGATATATCCAATGG
GATAAGTTCAAGCATCTCAGCATGGGGTATGCTGATTGTAACGGCTGGGC
TTCGTGGGGGAATTAGAGCGTATCAGACTTTTGGATTGCCACGTCGAATT
TAACGTCCTGGAACAATAGAAATGTAAAAAATGACCGGAGCTCAATGTTG
GGGGTGATATGATTACAAGTCGATTGCTTNCGTTCCCCTCATGGNTAATG
TGACAGAGAGATATGGGGAGATTTGAATATTAGGAGGTCATTTCTTCTTC
TTGGGGCTGGGC
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