EY692366

Overview
NameEY692366
Unique NameEY692366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.980e-70
Identity = 148/211 (70.14%), Postives = 165/211 (78.20%), Query Frame = 3
Query:  195 RAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW-SCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRPIIFWKIPS*SF 824
            R FSS S++P ++  LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LANSVDLGSLRDPQQDAERVK P   W    G+ T        NA G     FCP  G +  IS G  +KG  P    ++P+ SF
Sbjct:   44 RGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPE--WLVVIGVCTHLGCIPLPNA-GDFGGWFCPCHGSHYDIS-GRIRKGPAPYNL-EVPTYSF 249          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.410e-70
Identity = 150/220 (68.18%), Postives = 167/220 (75.91%), Query Frame = 3
Query:  168 LGPQFQLPCRAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW-SCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRPIIFWKIPS*SF 824
            L  QF    R FSS S++P ++  LV  +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEEDI LANSVDLGSLRDPQQDAERVK P   W    G+ T        NA G     FCP  G +  IS G  +KG  P    ++P+ SF
Sbjct:   45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPE--WLVVIGVCTHLGCIPLPNA-GDFGGWFCPCHGSHYDIS-GRIRKGPAPYNL-EVPTYSF 259          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 9.825e-70
Identity = 149/220 (67.73%), Postives = 167/220 (75.91%), Query Frame = 3
Query:  168 LGPQFQLPCRAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW-SCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRPIIFWKIPS*SF 824
            L  QF    R FSS S++P ++  LV  +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT+EDI LANSVDLGSLRDPQQDAERVK P   W    G+ T        NA G     FCP  G +  IS G  +KG  P    ++P+ SF
Sbjct:   45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPE--WLVVIGVCTHLGCIPLPNA-GDFGGWFCPCHGSHYDIS-GRIRKGPAPYNL-EVPTYSF 259          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.283e-69
Identity = 147/211 (69.67%), Postives = 164/211 (77.73%), Query Frame = 3
Query:  195 RAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW-SCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRPIIFWKIPS*SF 824
            R FSS S++  ++  LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LANSVDLGSLRDPQQDAERVK P   W    G+ T        NA G     FCP  G +  IS G  +KG  P    ++P+ SF
Sbjct:   58 RGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPE--WLVVIGVCTHLGCIPLPNA-GDFGGWFCPCHGSHYDIS-GRIRKGPAPYNL-EVPTYSF 263          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.876e-69
Identity = 146/209 (69.86%), Postives = 163/209 (77.99%), Query Frame = 3
Query:  201 FSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW-SCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRPIIFWKIPS*SF 824
            FSS S++  ++  LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LANSVDLGSLRDPQQDAERVK P   W    G+ T        NA G     FCP  G +  IS G  +KG  P    ++P+ SF
Sbjct:   24 FSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPE--WLVVIGVCTHLGCIPLPNA-GDFGGWFCPCHGSHYDIS-GRIRKGPAPYNL-EVPTYSF 227          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.853e-68
Identity = 145/211 (68.72%), Postives = 164/211 (77.73%), Query Frame = 3
Query:  195 RAFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW-SCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRPIIFWKIPS*SF 824
            R FSS S++P ++  LV  +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYAS +RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT++DIKLANSVDLG+LRDPQQDAERVK P   W    G+ T        NA G     FCP  G +  IS G  +KG  P    ++P+ SF
Sbjct:   51 RGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPE--WLVVVGVCTHLGCIPLPNA-GDFGGWFCPCHGSHYDIS-GRIRKGPAPYNL-EVPTYSF 256          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.960e-67
Identity = 142/217 (65.44%), Postives = 166/217 (76.50%), Query Frame = 3
Query:  180 FQLPCRAFSS-ESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW-SCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRPIIFWKIPS*SF 824
            F +  R FSS E++ PRN+++ +  +PATVAAVKNP  K+VYDEYNHERYPPGDPSKRAFAYFVL+GGRF+YASL+RLL+LKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DIKLANSVD+ SLR P+QDAERVK P   W    G+ T        NA G     FCP  G +  IS G  +KG  P    ++P+ SF
Sbjct:   53 FFVASRGFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPE--WLVVIGVCTHLGCIPLPNA-GDFGGWFCPCHGSHYDIS-GRIRKGPAPFNL-EVPTYSF 264          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.622e-22
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 3
Query:  348 RAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAWSCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRPIIFWKIPS*SFPGKR 836
            R++AYF++     + ++  +  +  F+ SM+A+ DVLAMA +EV+L++I  G  V VKW+GKPVFIR RT  +I+ ANSVD+ +L+DPQ DA+RVK P+  W       + L  +     G     FCP  G +  IS G  +KG  P+   +IP+  F G +
Sbjct:   53 RSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQ--WLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDIS-GRIRKGPAPLNL-EIPAYEFDGDK 211          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.622e-22
Identity = 67/158 (42.41%), Postives = 93/158 (58.86%), Query Frame = 3
Query:  354 FAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAWSCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRPIIFWKIPS*SFP 827
            F+YF++     + A+  +  I +F+ +MSAS DVLAMA +EVDL++I  G  V +KWRGKPVFIR RT  +I+ AN V++ +LRDP+ DA+RVKKP   W       + L  +     G     FCP  G +  IS G  +KG  P+   +IP   FP
Sbjct:   70 FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPE--WLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDIS-GRIRKGPAPLNL-EIPLYEFP 223          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_CERAE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cercopithecus aethiops GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.341e-22
Identity = 56/139 (40.29%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  252 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSK---------RAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKP 641
            VPA+V    + T   V D Y++ R    D +K         + F+Y V        A   + ++ +F+ SMSAS DVLAMA +E++LS I  G  +  KWRGKP+F+R RT+++I+   +V+L  LRDPQ D +RVKKP
Sbjct:   72 VPASVCY--SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFISSMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEEEAAVELSQLRDPQHDLDRVKKP 208          

HSP 2 Score: 29.6462 bits (65), Expect = 7.341e-22
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  631 LKNPEWLGVVGGCTHLG 681
            +K PEW+ ++G CTHLG
Sbjct:  205 VKKPEWVILIGVCTHLG 221          
The following BLAST results are available for this feature:
BLAST of EY692366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
UCRI1_TOBAC1.980e-7070.14Cytochrome b-c1 complex subunit Rieske-1, mitochon... [more]
UCRI3_TOBAC4.410e-7068.18Cytochrome b-c1 complex subunit Rieske-3, mitochon... [more]
UCRI5_TOBAC9.825e-7067.73Cytochrome b-c1 complex subunit Rieske-5, mitochon... [more]
UCRI2_TOBAC1.283e-6969.67Cytochrome b-c1 complex subunit Rieske-2, mitochon... [more]
UCRI4_TOBAC4.876e-6969.86Cytochrome b-c1 complex subunit Rieske-4, mitochon... [more]
UCRI_SOLTU1.853e-6868.72Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_MAIZE5.960e-6765.44Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_YEAST2.622e-2239.88Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_NEUCR2.622e-2242.41Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_CERAE7.341e-2240.29Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-059-F08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692366 ID=EY692366; Name=EY692366; organism=Citrus sinensis; type=EST; length=940bp
CCCACGCGTCCGAGATGTTGAGGGTCGCGGCGAGAAGGCTCTTATCACCA
TCCTCATCATCGTCATTGAGGCCCATGGCATCGTCTCGGAATATAATTAA
CGGCGCCGGTTCATCGTCCTCCTCCAACGATGATTTCAGATCCAACGGCT
TCTATGGCTCCGGATATCTTGGACCTCAGTTTCAACTTCCTTGCCGAGCT
TTTTCTTCTGAGTCACTGACACCAAGAAATGAAGAAAGCCTGGTTCCAGG
TGTTCCAGCAACAGTGGCAGCTGTTAAGAATCCCACTTCTAAGATAGTAT
ATGATGAATACAATCATGAACGTTATCCTCCAGGTGACCCCAGCAAGCGG
GCATTTGCCTACTTTGTCCTGACTGGTGGTAGGTTTGTGTACGCTTCACT
CATCCGTCTACTTATCCTTAAATTTGTACTGAGCATGTCAGCGAGTAAGG
ATGTTCTTGCTATGGCCTCTCTTGAGGTTGATCTGTCCAGCATTGAGCCA
GGCAGCACAGTGACTGTTAAGTGGCGAGGCAAGCCAGTTTTCATCAGACG
TCGGACTGAGGAAGATATCAAGCTGGCCAACAGTGTTGATTTGGGATCTC
TTCGTGATCCTCAGCAAGACGCTGAGAGGGTTAAAAAACCCAGAGTGGCT
TGGAGTTGTTGGGGGCTGCACACATCTTGGTTGGCATTTCTTTGGCAAAA
TGCTTGGGGATTTTTGGTGGATGGGTTTTGCCCTTTGCAAGGGTTTTACT
TACCAATTTCTCTGGGTGGTTTCCAAAAGGGGACCAGGCCCATAATATTT
TGGAAGATCCCCTCTTAATCCTTTCCTGGGAAAAGAACATGATGGACCCT
TGGGGTTGATAATGGGTAGGACCTTCTGGACGCTGGGAATCCGGGGGTGA
TTAGGAGGGTTTCAGTAATTTTTTTTTTTTGTATCAAGTT
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