EY692356

Overview
NameEY692356
Unique NameEY692356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length386
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5605 contig Csv1_Contig5605:124..509. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY692356 vs. ExPASy Swiss-Prot
Match: COX12_SCHPO (Cytochrome c oxidase subunit 6B OS=Schizosaccharomyces pombe GN=cox12 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.789e-12
Identity = 27/48 (56.25%), Postives = 38/48 (79.17%), Query Frame = 3 
Query:   30 EFHRCLAAKGEDSNECERFAKYYRSLCPGDWIEKWNEQRENGTFPGPL 173
            ++ RC+ AKGED   C++F   Y+SLCP +W+E+W+EQRENGTFP P+
Sbjct:   39 DYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWVERWDEQRENGTFPAPI 86
The following BLAST results are available for this feature:
BLAST of EY692356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
COX12_SCHPO1.789e-1256.25Cytochrome c oxidase subunit 6B OS=Schizosaccharom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-059-E10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692356 ID=EY692356; Name=EY692356; organism=Citrus sinensis; type=EST; length=386bp
AACCAGACATTGCTTCACCCGCTCTTTTTGAGTTTCATAGGTGCTTGGCA
GCAAAGGGGGAAGACTCTAATGAATGTGAAAGATTTGCTAAATACTATCG
TTCTCTCTGCCCCGGTGACTGGATTGAGAAGTGGAACGAGCAGAGGGAAA
ACGGGACGTTCCCAGGTCCTCTTTAAACTTGCATCAGCACTCGGGTGGCT
TTTCTTTTGGATGAAAAGTTCATATTGCTCTGTTTATTTGCTTCCTGATC
ATGTTTTTTCATTTAAGCCTGAAAACCAATAAGGCAACAGTTAAAGATTG
TTTTGAATGGTGATGCTTTAGTTATTGACTTATTGTGCATGGTCAATAAG
CAAAAGACCTTTGAAAAGCAAAAAAAAAAAAAAAAA
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