EY692246

Overview
NameEY692246
Unique NameEY692246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692246 vs. ExPASy Swiss-Prot
Match: NCS_THLFG (S-norcoclaurine synthase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 3 
Query:   18 LSHELEVNVPAGQAWELYGTIKLVKLVEKEYXXXXXXXXXXXXXXXXXXLHIKFKPGTPGFAGYKEKFIEIDNKKRVRVTDVVEGGYLDVGFTLFRVIFEIIKKGSDSCIIKSTIKYELR 377
            + HELEV   A   W +Y    L K +                      L + F PG      YKEKFI +DN+ R++   ++EGGYLD+G T +     ++  G DSC+IKS+ +Y ++
Sbjct:   46 IHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEIIGDGGVGTILDMTFVPGEFPHE-YKEKFILVDNEHRLKKVQMIEGGYLDLGVTYYMDTIHVVPTGKDSCVIKSSTEYHVK 164
The following BLAST results are available for this feature:
BLAST of EY692246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NCS_THLFG1.461e-1132.50S-norcoclaurine synthase OS=Thalictrum flavum subs... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-098-H04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692246 ID=EY692246; Name=EY692246; organism=Citrus sinensis; type=EST; length=886bp
AATAAATGAAAGGGCAACTTTCCCATGAGTTGGAGGTAAATGTGCCAGCC
GGCCAAGCTTGGGAACTCTATGGCACAATCAAATTGGTAAAGCTTGTTGA
AAAAGAGTATGATACCGTTGAAGAAATTGAAGTTGTTGAGGGGGATGGAG
GTGTTGGCACCATTCTTCACATCAAATTTAAACCAGGCACACCGGGTTTT
GCTGGTTACAAAGAGAAGTTCATTGAGATCGATAACAAGAAACGAGTGAG
AGTAACAGATGTTGTGGAAGGAGGGTATCTCGATGTGGGATTTACTCTAT
TTAGAGTGATATTTGAGATCATAAAGAAAGGGAGTGATTCCTGCATCATC
AAATCAACAATCAAGTATGAACTCAGAGATAAAACTGCTGCTTATGCTTC
CTTTGTGAGTATCGATAACAGTGGCGAAGATTGCAGAAATCTCCCAGAAT
TATCTCCTCCACAACAAGGGATTAAGCTCAAGGACTTGTAAATCCCCCTT
CCTTCAATTATCCGCTCCCCGTCAGCAACCAAGGCGAATAACTCCTCAGG
TATGGAACTGGAATTGTTTTTCAGCATAAACTTTCCAGTAAAATCCCGTT
GTTTTACCGGGAACAACAATTGGTCACTTATCCAAGGATTCATTCTAAAT
TTTTAGTGGGGGGCAATTTCTTTGATCAACCACCAAAGTGAATTGGATGG
TTACAACCCCTTTTTTTTTTTTTTTTTTTTTGTTTGGAGAAAAGGCTTAC
ACCGCGCATACTTAAAAAACCCAGTCACTTTCCGCGATAACACTTCTTTG
GTACAAATCCTACAGGTGTTTTTCACCAAAAAAACAACATCACATCTAAT
CATCACAAAAAATAAAATAAATATTCTAAAAATTCA
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