EY692241

Overview
NameEY692241
Unique NameEY692241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig124 contig Csv1_Contig124:1832..2797. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY692241 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.782e-29
Identity = 61/99 (61.62%), Postives = 80/99 (80.81%), Query Frame = 2 
Query:   38 AVENVEV-HMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 331
            A+E++++ H+++K P+ FDGE+SS  + +LSDNRSPTA +S+ VRGCGRFG YSSQRPLKC V S +TDFTYD+  GL+T+ LPV  EEM+RW VEI V
Sbjct:  676 AIESIDINHVTDKNPEFFDGEISSA-SPALSDNRSPTALVSVSVRGCGRFGAYSSQRPLKCAVESTETDFTYDAEVGLVTLNLPVTREEMFRWHVEILV 773
The following BLAST results are available for this feature:
BLAST of EY692241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RFS2_ARATH1.782e-2961.62Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-098-G06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692241 ID=EY692241; Name=EY692241; organism=Citrus sinensis; type=EST; length=968bp
CCGGGGAATATTTCCCCGGGGTCGAACCCCGCGTCCGGCTGTCGAGAATG
TGGAGGTGCATATGTCTGAGAAGAAGCCAGATCTCTTTGATGGTGAAGTA
TCTTCTGAACTGACCACCTCCCTCAGTGACAACCGATCTCCAACCGCCAC
AATCTCTCTCAAAGTTAGGGGATGTGGAAGGTTTGGCATTTACTCTTCCC
AGCGTCCTCTGAAATGCACCGTGGGCAGCATCCAGACCGACTTCACCTAC
GATTCTGCAACCGGGTTGATGACCATGACACTCCCGGTTCCGGAGGAAGA
GATGTACAGATGGCCTGTTGAGATCCAAGTCTAAGGACTTTCATGTTATG
TTATTAAATAACATCAGATTGTTAGATTTGTCACCATGTTCAGGGGTGGT
TTCCATTCTAGTGGGAAGCTGTGGTGAAACATGACTTGCATTTGAGTGAT
GATCATGAAAAGAATAATTGCTAGAATTATGTTGCTGTTTGGTTCTCTTG
TAATAAAAGTGGTCTGAATCCTCTGATCTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAGGGCGGGCGCTCTAAAAGAATCCAGCTTAAGTACCCGTGGA
ATGCGAACACCTAACTCTTCTATAAGGGCCCCAAAATTTCAATTCACCTG
GCAGTCATTTTTATCACACGTCGAGAATGAGAAAAAAACCTGGGGATATA
CCAAACTTAAATCACCCTTGAAAACAAATCCCCCTTTTAACTAAATTAGA
CATATATACGAAAAAAATCCAAACACAGATACCACCTTTCCATGCAATTG
AAAAGAACTTTGATAGGAAAAAGAGAAAAAACCTCCCAGAATAAACAAAA
AAATTAAAAGAAGGAAAGAAAAATGAAAAAAGGAATATCAGAACAAAGAG
AAAGAGAAAAATAAAAAAATGTTAAGATGAAGAAGTACAATACACCATGG
GTTTAAGCATGATAGGGT
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