EY692173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_RHOCS (50S ribosomal protein L4 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rplD PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.215e-32 Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRM 444 T KKPWRQKGTGRAR G+ R PQFRGGA + GP RSH L KKVR+L LK ALS +AAEGKL V E + +HKTK + + T L+ DG + E A +N+ +++VLP G NVY IL+ D LV++R+AV ++ R+ Sbjct: 59 TTKKPWRQKGTGRARQGSTRSPQFRGGARIFGPVVRSHEHDLTKKVRKLALKTALSTKAAEGKLFVLEAAKADTHKTKALAAQLKTLGLT-SALIIDGANLDETFVRAARNIPHLDVLPEQGANVYDILRRDVLVLTRNAVEQLEARL 205
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_RHORT (50S ribosomal protein L4 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rplD PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.872e-32 Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRM 444 T KP++QKGTG AR G+ R PQFRGGAT+ GP RSHA LNKKVR+LGLK ALSA+A G+L+V + S KTK ++ + +KVL DG ++EK LA +N+ ++VLP G NVY IL+ DTLV++++AV + +R+ Sbjct: 59 TTAKPFKQKGTGHARQGSKRSPQFRGGATIFGPVVRSHAHDLNKKVRKLGLKTALSAKAQAGQLIVLDQAISESGKTKDLLAQLKVL-GLEKVLFIDGPEVNEKFALAARNIIGLDVLPQQGANVYDILRRDTLVLTKEAVKHLEERL 205
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_SPHWW (50S ribosomal protein L4 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rplD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.343e-31 Identity = 70/149 (46.98%), Postives = 97/149 (65.10%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRMH 447 TGKK RQKG G ARHG R P F GG HGP+ R LNKKVR LGLK+ALS++A +GKL+V + LE+ KTK ++ ++ L+ DG + +LA+ N+H +NVLP++G NVY IL+H+TLV++R AV ++ R + Sbjct: 59 TGKKFGRQKGGGTARHGDRRAPVFIGGGKAHGPRARVFESSLNKKVRALGLKMALSSKAKDGKLVVVDTLELKDAKTKALIAKIGKLGFGATALVIDGEAVDNGFQLASSNIHTINVLPAIGANVYDILKHETLVLTRAAVEKLEARFN 207
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_RICBR (50S ribosomal protein L4 OS=Rickettsia bellii (strain RML369-C) GN=rplD PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 69/148 (46.62%), Postives = 100/148 (67.57%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRM 444 T KKP++QKGTG AR G+LR Q RGG +HGP RSHA KL KKVR+LGL ALS + +EGKLLV + L++ + KT +VN N+ + K + DG + LA QN++ V+P +G NVY I++H+ +++S++AVN + +R+ Sbjct: 60 TTKKPFKQKGTGNARQGSLRSVQMRGGGVIHGPVVRSHATKLPKKVRKLGLIHALSEKFSEGKLLVIDSLKLETPKTSNLVNILNKFQG-KSFFVIDGNEVDVNFSLAAQNIYNTVVVPQIGANVYDIIRHEYVLLSQEAVNVLEERL 206
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_RICB8 (50S ribosomal protein L4 OS=Rickettsia bellii (strain OSU 85-389) GN=rplD PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 69/148 (46.62%), Postives = 100/148 (67.57%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRM 444 T KKP++QKGTG AR G+LR Q RGG +HGP RSHA KL KKVR+LGL ALS + +EGKLLV + L++ + KT +VN N+ + K + DG + LA QN++ V+P +G NVY I++H+ +++S++AVN + +R+ Sbjct: 60 TTKKPFKQKGTGNARQGSLRSVQMRGGGVIHGPVVRSHATKLPKKVRKLGLIHALSEKFSEGKLLVIDSLKLETPKTSNLVNILNKFQG-KSFFVIDGNEVDVNFSLAAQNIYNTVVVPQIGANVYDIIRHEYVLLSQEAVNVLEERL 206
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_RICTY (50S ribosomal protein L4 OS=Rickettsia typhi GN=rplD PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.991e-31 Identity = 67/148 (45.27%), Postives = 99/148 (66.89%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRM 444 T KKP++QKGTG AR G+LR Q RGG HGPK RSHAIKL KKVR+LGL ALS + A GKLL+ L++ KT +VN N+ + + + DG + LAT+N++ ++P +G NVY I++H+ +++S++AV+ + +R+ Sbjct: 60 TTKKPFKQKGTGNARQGSLRSIQMRGGGISHGPKVRSHAIKLPKKVRKLGLIHALSEKCAAGKLLIINSLKLEKPKTSVLVNLLNKFQG-QSFFIIDGNKVDTNFSLATKNIYNTLIVPQIGANVYDIIRHEYVLLSQEAVSFLEERL 206
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_RICRS (50S ribosomal protein L4 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rplD PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.907e-31 Identity = 68/148 (45.95%), Postives = 99/148 (66.89%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRM 444 T KKP++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGKLLV + L++ KT +VN N+ + K + DG + LA +N++ V+P +G NVY I++H+ +++S++AV+ + +R+ Sbjct: 60 TTKKPFKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLLVIDSLKLDKPKTSALVNILNKFQG-KSFFVIDGNEVDINFSLAAKNIYNTVVVPQIGANVYDIIRHEYVLLSQEAVSVLEERL 206
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_RICRO (50S ribosomal protein L4 OS=Rickettsia rickettsii (strain Iowa) GN=rplD PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.907e-31 Identity = 68/148 (45.95%), Postives = 99/148 (66.89%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRM 444 T KKP++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGKLLV + L++ KT +VN N+ + K + DG + LA +N++ V+P +G NVY I++H+ +++S++AV+ + +R+ Sbjct: 60 TTKKPFKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLLVIDSLKLDKPKTSALVNILNKFQG-KSFFVIDGNEVDINFSLAAKNIYNTVVVPQIGANVYDIIRHEYVLLSQEAVSVLEERL 206
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_RICPU (50S ribosomal protein L4 OS=Rickettsia peacockii (strain Rustic) GN=rplD PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.907e-31 Identity = 67/148 (45.27%), Postives = 99/148 (66.89%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRM 444 T KKP++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGKLLV + L++ KT +VN N+ + K + DG + LA +N++ ++P +G NVY I++H+ +++S++AV+ + +R+ Sbjct: 60 TTKKPFKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLLVIDSLKLDKPKTSVLVNILNKFQG-KSFFVIDGNEVDINFSLAAKNIYNTVIVPQIGANVYDIIRHEYVLLSQEAVSVLEERL 206
BLAST of EY692173 vs. ExPASy Swiss-Prot
Match: RL4_RICFE (50S ribosomal protein L4 OS=Rickettsia felis GN=rplD PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.907e-31 Identity = 67/148 (45.27%), Postives = 99/148 (66.89%), Query Frame = 1 Query: 1 TGKKPWRQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPSHKTKFIVNYYNQMENTKKVLLCDGGCIHEKLKLATQNLHYVNVLPSVGLNVYSILQHDTLVMSRDAVNEIVDRM 444 T KKP++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGKLLV + L++ KT +VN N+ + K + DG + LA +N++ ++P +G NVY I++H+ +++S++AV+ + +R+ Sbjct: 60 TTKKPFKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKFAEGKLLVIDSLKLDKPKTSVLVNILNKFQG-KSFFVIDGNEVDTNFSLAAKNIYNTVIVPQIGANVYDIIRHEYVLLSQEAVSVLEERL 206 The following BLAST results are available for this feature:
BLAST of EY692173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692173 ID=EY692173; Name=EY692173; organism=Citrus sinensis; type=EST; length=912bpback to top |