EY692105

Overview
NameEY692105
Unique NameEY692105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1014
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692105 vs. ExPASy Swiss-Prot
Match: 5NG4_PINTA (Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.531e-22
Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 2 
Query:   95 NWVIGGLLLAIDCVFTSAWLIVQASILKKFSAELIVVFFYCFFVAIQSAILCLVMERDLNSWSLKPGVRLVAVLYSAVFGSAFQVGVCTWCLHRTGPVICSYVQAL*VL*ISTVVGTIFLGKTVYLERFMGAFVIVTGFNSVDEGKSQRRKLG 553
            NW +G + L  +C+  S W+++QA +LK++ A L V  F CFF  IQ  I+    E DL  W +  G  L  +LY+    S     V  WC+ R GPV  +  Q +  + ++ ++ +I LG+  YL    GA +I+ G   V  GKS+ ++LG
Sbjct:  196 NWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLIIAAFFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVA-IMASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEEKRLG 347
The following BLAST results are available for this feature:
BLAST of EY692105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
5NG4_PINTA6.531e-2234.64Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-G12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692105 ID=EY692105; Name=EY692105; organism=Citrus sinensis; type=EST; length=1014bp
CCGGGAAATTCCACGGGGTCGAACCACGCGTCCGCACCTTCTGATGACAT
CTTCGCCTCCAAACTTGTCCCTTCAATTTTTCGTGCCGCAAACAAACTGG
GTCATTGGTGGATTGCTCCTTGCCATTGATTGTGTGTTCACTTCAGCATG
GCTCATTGTACAGGCCTCAATCCTTAAGAAATTCTCAGCTGAGCTGATCG
TCGTCTTTTTTTACTGCTTCTTTGTGGCCATTCAATCTGCAATACTCTGT
TTGGTTATGGAAAGAGACCTAAATAGCTGGAGCTTAAAACCTGGTGTGAG
GTTAGTTGCTGTGCTATACTCGGCTGTTTTTGGCTCTGCATTCCAAGTTG
GTGTTTGTACCTGGTGCCTGCACAGAACTGGGCCCGTAATTTGTAGCTAT
GTTCAAGCCCTATGAGTATTGTAAATTTCAACTGTGGTGGGTACCATCTT
CCTAGGAAAGACAGTCTACCTTGAGAGATTTATGGGAGCATTTGTAATTG
TTACTGGGTTTAATTCTGTTGATGAGGGGAAAAGCCAAAGAAGGAAACTA
GGGTGGGGAAACTGGAAGAAAAAAACTTAAAAACCAGCTACCAAAGAGAA
CCCCTTCTTTGCTAAACAATTTTAAAGAAAAAAAAAAGTTTTGCAAAAAA
AAATAAAGACCAAAATAAAAAAAAATAGAGGGGGAAGAAAGAATAATCGA
AAATATTAAAAATGGCATTGGGCATGAAGAACATTAGCTTATATTATGAA
TTCTGGAATCAGGGAAAAATGGGCCGGACCCACACATTCTTTGAGAAACC
ACAAAAAACAAAAACTAAAAAACTATAAAAAAGGAAAAAAAACTCAGACA
AAATCCCGGAAACTACGAGAAAAAAAAAAAATGGTGAGAAAGAGAAAATA
AATGGAAAATATTAAACAACTCACACACCCTCTTAGCCAATCACGGATAA
GTCAATTATCTACACGGGGAATTAAAGTACGGATGTGATGGAATTGAATT
GTGAGCTTTATTAT
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