EY692017

Overview
NameEY692017
Unique NameEY692017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1059
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.453e-59
Identity = 107/130 (82.31%), Postives = 119/130 (91.54%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLPAN 421
            ++ STGG+ET+AF+LS GV+ WNAVVFEIVMTFGLVYTVYATAVDPKKG++G IAP+AIG IVGANIL GGAFDGASMNPAVSFGPAVVSW WTNHWVYW+GPFIGAAIAAIVYD IFI  N H+PLP+N
Sbjct:  121 LKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGSNGHEPLPSN 250          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.393e-54
Identity = 100/126 (79.37%), Postives = 110/126 (87.30%), Query Frame = 2
Query:   38 FSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLP 415
            F+TGG    AF LS+GV S NA+VFEIVMTFGLVYTVYATAVDPK G+LGTIAPIAIGFIVGANILAGGAF GASMNPAV+FGPAVVSWTWTNHWVYW GP IG  +A I+YD +FID+NAH+ LP
Sbjct:  124 FATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDENAHEQLP 249          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 4.053e-54
Identity = 100/128 (78.12%), Postives = 111/128 (86.72%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLP 415
            ++ +TGG    AF+LS+GV +WNAVVFEIVMTFGLVYTVYATAVDPKKG+LG IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV+  W NHWVYWLGPF+GAAIAA++YD IFI    H  LP
Sbjct:  121 LKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIAALIYDIIFIGQRPHDQLP 248          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 9.345e-51
Identity = 97/128 (75.78%), Postives = 108/128 (84.38%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLP 415
            ++ +TGG    AF+LS+GV + NAVV E+VMTFGLVYTVYATAVDPKKG+LG IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV+  W NHWVYW+GP  GAAIAA+VYD IFI    HQ LP
Sbjct:  121 LKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWENHWVYWVGPLAGAAIAALVYDIIFIGQRPHQQLP 248          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.719e-50
Identity = 94/128 (73.44%), Postives = 107/128 (83.59%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLP 415
            ++F+TGGL   AF LS+GV   NA VFEIVMTFGLVYTVYATA+DPK G+LGTIAPIAIGFIVGANILAGGAF GASMNPAV+FGPAVVSWTWTNHWVYW GP +G  IA ++Y+  FI +  H+ LP
Sbjct:  121 LKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAGLIYEVFFI-NTTHEQLP 247          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 6.697e-49
Identity = 93/128 (72.66%), Postives = 108/128 (84.38%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLP 415
            +RFSTGGL T  F L+ GVS W A+V EIVMTFGLVYTVYATAVDPKKG+LGTIAPIAIGFIVGANIL GGAFDGASMNPAVSFGPA+VSW+W + WVYW+GP IG  +A ++Y+ +FI  + H+ LP
Sbjct:  121 LRFSTGGLATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWESQWVYWVGPLIGGGLAGVIYEVLFI-SHTHEQLP 246          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.263e-47
Identity = 92/129 (71.32%), Postives = 106/129 (82.17%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLPA 418
            +RFSTGG  T  F L+ GVS W A+V EIVMTFGLVYTVYATAVDPKKG+LGTIAPIAIGFIVGANIL GGAFDGASMNPAVSFGPA+VSW W   WVYW+GP IG  +A ++Y+ +FI  + H+ LP+
Sbjct:  121 LRFSTGGQATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAGVIYELLFI-SHTHEQLPS 247          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.439e-45
Identity = 88/117 (75.21%), Postives = 98/117 (83.76%), Query Frame = 2
Query:   65 AFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLP 415
            AF LS GV    A+V EIVMTFGLVYTVYATAVDPKKGN+G IAPIAIGFIVGANIL GGAF GASMNPAVSFGPAVVSW+W+NHWVYW GP IG  IA +VY+ +FI ++ H+ LP
Sbjct:  131 AFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFI-NSTHEQLP 246          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 3.439e-45
Identity = 88/117 (75.21%), Postives = 98/117 (83.76%), Query Frame = 2
Query:   65 AFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLP 415
            AF LS GV    A+V EIVMTFGLVYTVYATAVDPKKGN+G IAPIAIGFIVGANIL GGAF GASMNPAVSFGPAVVSW+W+NHWVYW GP IG  IA +VY+ +FI ++ H+ LP
Sbjct:  130 AFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFI-NSTHEQLP 245          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.912e-44
Identity = 79/137 (57.66%), Postives = 105/137 (76.64%), Query Frame = 2
Query:   20 STPRVRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD------NAHQPL 412
            +T  +R +TGG+    FAL+SGV  W+AV+ E VMTFGL+Y  YAT +DPK+G++GTIAP+A+GF++GAN+LAGG FDGA MNPA  FGPA+V W W +HWVYWLGPF+GA +A +VY+++ I        +AHQPL
Sbjct:  121 ATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYLVIPSADAAVPHAHQPL 257          
The following BLAST results are available for this feature:
BLAST of EY692017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
TIP13_ARATH2.453e-5982.31Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP12_ARATH1.393e-5479.37Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP12_ORYSJ4.053e-5478.13Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP12_MAIZE9.345e-5175.78Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP11_ARATH2.719e-5073.44Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP11_ORYSJ6.697e-4972.66Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP11_MAIZE1.263e-4771.32Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP1_MEDTR3.439e-4575.21Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP1_MEDSA3.439e-4575.21Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP31_MAIZE2.912e-4457.66Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-E12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692017 ID=EY692017; Name=EY692017; organism=Citrus sinensis; type=EST; length=1059bp
CCGGGGAAATTTCCCGGGGTCGACCCCACGCGTCCGGTTTTCCACCGGTG
GATTGGAAACATCGGCATTCGCACTATCATCTGGCGTCTCATCATGGAAT
GCAGTTGTGTTTGAGATTGTGATGACCTTTGGCTTGGTCTACACAGTGTA
TGCAACAGCAGTGGATCCAAAGAAGGGAAATCTGGGCACTATTGCACCAA
TTGCAATCGGTTTCATTGTTGGTGCCAACATTTTGGCTGGTGGCGCTTTT
GATGGTGCATCAATGAACCCAGCAGTCTCTTTTGGTCCTGCTGTGGTTAG
CTGGACTTGGACTAACCACTGGGTCTACTGGCTTGGACCATTTATTGGTG
CCGCGATTGCGGCCATTGTTTACGACCACATCTTCATCGATGACAACGCT
CACCAACCACTTCCTGCCAATGAAATTCTAACAATCTAATTAATCATAGA
GCTATTGTCACTCTTATCGTTTTAAATCATGAAAAGAATTGAAGCTAGAG
TATTCTTCTGACTTTAATTGGTTGATGATGATAATATAAATAAAAATAAA
AAAGAGAGGAAGAGAATAAAAAAAAATAAAAACAATGGAAACAAAATCAA
TAAGAACACAGTGTGAAAGCCTCAGCACTAAGTTACGAAACAGTTGATAT
AAGGGAGAGACAGTGTTGCAGTTCACTGGCCCTTAACTTACAACACGTAC
AACAATGTACACATCAGAAGTATCGTGTAATGAACTCATCTAAATCAGAA
CCAACGACCAAGAGCAGTCATAAGAAATAACACGAAAGTATCATAACAAA
AACACTAAAAACAGAAACGTACACATGATCAGAAGTGTAAATATTTGTGA
ACAATCAATTATACAGCATACCAGTTGGAGAATGAATACAAAAAAAAAAA
AAAAAAAAAAAACAAAACTAGAAAAACAAGACAAAAACGAGTTCAAAAAC
AACCAATGACAAAACACTGAAGACCTTGCCCTATGCAGACATCAACCTGC
TCCAAAGCAAACAAGACACAACGACAAAATACATACTTAGAACCACAATG
CAACCACAC
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