EY691852

Overview
NameEY691852
Unique NameEY691852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 6.203e-70
Identity = 134/178 (75.28%), Postives = 143/178 (80.34%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM KYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ                   G   + HAQE LR   +  F   + ++V++K GFT+
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDG--NSHHAQEALRRA-KFKFPARQKIIVSRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.382e-69
Identity = 134/178 (75.28%), Postives = 143/178 (80.34%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ                   G   + HAQE LR   +  F G + ++V++K GFT+
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDG--NSNHAQEALRRA-KFKFPGRQKIIVSRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 5.251e-69
Identity = 133/178 (74.72%), Postives = 143/178 (80.34%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ                       + +AQE LR   +  F G + ++V++K GFT+
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDN--NSHNAQEALRRA-KFKFPGRQKIIVSRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL101_ORYSJ (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 4.445e-68
Identity = 131/178 (73.60%), Postives = 142/178 (79.78%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ                  +    A HA+E LR   +  F G + ++ ++K GFT+
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKES--NAKHAEEALRRA-KFKFPGRQKIIHSRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL101_ORYSI (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34 PE=2 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 4.445e-68
Identity = 131/178 (73.60%), Postives = 142/178 (79.78%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ                  +    A HA+E LR   +  F G + ++ ++K GFT+
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKES--NAKHAEEALRRA-KFKFPGRQKIIHSRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 9.269e-66
Identity = 129/178 (72.47%), Postives = 138/178 (77.53%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEF  CVHLVSWEKENV+SEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ                       A HA E LR   +  F G + ++ ++K GFT+
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPN--NAVHASEALRRA-KFKFPGRQKIIESRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 9.269e-66
Identity = 129/178 (72.47%), Postives = 138/178 (77.53%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEF  CVHLVSWEKENV+SEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ                       A HA E LR   +  F G + ++ ++K GFT+
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPN--NAVHASEALRRA-KFKFPGRQKIIESRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL103_ARATH (60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.211e-65
Identity = 128/178 (71.91%), Postives = 138/178 (77.53%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK                           HAQE LR   +  F G + ++V++K GFT+
Sbjct:    1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDN--HGVHAQEALRRA-KFKFPGRQKIIVSRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.211e-65
Identity = 128/178 (71.91%), Postives = 138/178 (77.53%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK                           HAQE LR   +  F G + ++V++K GFT+
Sbjct:    1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKD--AHGHHAQEALRRA-KFKFPGRQKIIVSRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.697e-65
Identity = 126/179 (70.39%), Postives = 138/179 (77.09%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQH 583
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRI+DVG KK+ VDEFPFCVHLVSWEKENVSSEALEA RIACNKYM K+AGKD FHLRVRVHPFHVLR NKMLSCAGADRLQTGMRGAFGKPQ                       + HAQE LR   +  F G + ++V +K GFT++
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGAKKRLVDEFPFCVHLVSWEKENVSSEALEAGRIACNKYMVKFAGKDGFHLRVRVHPFHVLRSNKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRSRDN--HSNHAQEALRRA-KFKFPGREKIIVNRKWGFTKY 176
The following BLAST results are available for this feature:
BLAST of EY691852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
RL10_VITRI6.203e-7075.2860S ribosomal protein L10 OS=Vitis riparia GN=RPL1... [more]
RL10_SOLME1.382e-6975.2860S ribosomal protein L10 OS=Solanum melongena GN=... [more]
RL10_EUPES5.251e-6974.7260S ribosomal protein L10 OS=Euphorbia esula GN=RP... [more]
RL101_ORYSJ4.445e-6873.6060S ribosomal protein L10-1 OS=Oryza sativa subsp.... [more]
RL101_ORYSI4.445e-6873.6060S ribosomal protein L10-1 OS=Oryza sativa subsp.... [more]
RL102_ORYSJ9.269e-6672.4760S ribosomal protein L10-2 OS=Oryza sativa subsp.... [more]
RL102_ORYSI9.269e-6672.4760S ribosomal protein L10-2 OS=Oryza sativa subsp.... [more]
RL103_ARATH1.211e-6571.9160S ribosomal protein L10-3 OS=Arabidopsis thalian... [more]
RL101_ARATH1.211e-6571.9160S ribosomal protein L10-1 OS=Arabidopsis thalian... [more]
RL10_PINTA2.697e-6570.3960S ribosomal protein L10 OS=Pinus taeda GN=RPL10 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-027-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691852 ID=EY691852; Name=EY691852; organism=Citrus sinensis; type=EST; length=984bp
CCACGCGTCCGGAGAGAATAGCTGAGACCGAACACGAACGCTCGCCATGG
GAAGAAGACCGGCAAGGTGTTACCGCCAAATCAAGAACAAACCCTACCCA
AAGTCCCGCTTTTGCCGCGGTGTCCCCGATCCCAAGATCAGAATCTACGA
TGTCGGGATGAAGAAGAAAGGCGTCGACGAGTTCCCCTTCTGCGTTCACC
TCGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGGAAGCTGCC
CGTATCGCTTGCAACAAGTACATGGCCAAGTACGCCGGCAAGGATGCTTT
CCATTTGCGAGTGAGGGTGCACCCCTTCCATGTTCTGCGTATTAACAAGA
TGCTTTCGTGTGCTGGGGCTGATAGGCTCCAGACTGGAATGAGGGGTGCT
TTTGGAAAGCCCCAAGGAACCTGTGGCTCGTGTTTGCTATCGGGCAGGTC
TTTGCTTTTCTGTCCGTTGCAAGGGATAGTAACAGCCCCCCATGCTCAGG
AGGGCCTTCGCCCTGGCTAACGTTCAGGTTTCTGAGGCGTCAAAGGATTA
TTGGTCACCAAGAAAAGGGGATTTACCCAGCATCTACCGAGGAGATAATT
CGGGAGTGGGAAGACAGATATAAAGGGATAGTTACATGAAGGGTTGTCAA
GGGTCACTTTCTCCGGATTAATGGTACAATTGGATGATCCTACCACCAGT
ACAATCTATCATTGGGAAATACAGGACAAGAGAATTATTGTAAATACAAC
TAATAAGTGAGGGAAGTGTCGGCGAGCTCGTGAATAAAAATCATACTACG
CTCATGTAATTAACGATGGTACGTGAAAGAGTGCACGCAAGAGGAATTAA
GATGTAAAATTAAAAGAGGGAAATTATAACGTTTAATTGAGAGATTCATA
TGGAATAACATTACCTATGAAGGCAGATAATCGAAGAAAAAAGGAACTGG
AATCTATTGAAGAAGTAATAACAACGGACAAATA
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