EY691826

Overview
NameEY691826
Unique NameEY691826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_SORC5 (Urease accessory protein ureG OS=Sorangium cellulosum (strain So ce56) GN=ureG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.011e-19
Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 1
Query:    4 HEKNHGDSTATSWVGSDGRVYHSHDGLAPHSHEPIYSPGYFSRRAPPILSKNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRN 321
            HE  HG     +   +     H+H+    H+HE    PG FS R  P   ++F+ RAFTVGIGGPVG+GKTAL+LALC+ LRD+  L  V  D+FT+ED EFL RN
Sbjct:   46 HEHAHGHEHGHAHAHAHA---HAHEHAHGHTHEHWAHPGLFSERDAP-KDRDFSARAFTVGIGGPVGSGKTALVLALCRALRDRMPLGVVTNDIFTQEDAEFLHRN 147          
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_SCHPO (Uncharacterized urease accessory protein ureG-like OS=Schizosaccharomyces pombe GN=SPCPB16A4.05c PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.904e-18
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   55 GRVYHSHDGLAP---------------HSHEPIYSPG-YFSRRAPPILSKNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRN 321
            G  +HSHD  +                HSH+ + +PG Y  R  P    ++F+ RAFT+G+GGPVG+GKTAL+L LC+ L +KY +  V  D+FT+ED EFL+RN
Sbjct:   31 GHDHHSHDSSSNSSSEAARLQFIQEHGHSHDAMETPGSYLKRELPQFNHRDFSRRAFTIGVGGPVGSGKTALLLQLCRLLGEKYSIGVVTNDIFTREDQEFLIRN 135          
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_CYTH3 (Urease accessory protein ureG OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ureG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.477e-17
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 1
Query:  112 SPGYFSRRAPPILSKNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRN 321
            SPG+F  R      +NF +RAFTVGIGGPVGTGKTA ++ +CK LRDK  +A V  D+FT ED EFL+RN
Sbjct:   15 SPGHFHHRELIHEKRNFKKRAFTVGIGGPVGTGKTAWLMQICKALRDKMNIAVVTNDIFTSEDAEFLIRN 84          
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_ANADF (Urease accessory protein ureG OS=Anaeromyxobacter sp. (strain Fw109-5) GN=ureG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.594e-16
Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 1
Query:   73 HDGLAPHSHEPIYSPGYFSRRAPPILSKNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRN 321
            HD      H+    PG F  R  P    +   RAFTVG+GGPVG+GKTAL+LALC+ LRD   L  V  D+FT+ED EFL+RN
Sbjct:    2 HDHSLHSGHDHGLGPGSFHDRGAPHARGDLRRRAFTVGVGGPVGSGKTALVLALCRALRDSRSLGVVTNDIFTREDAEFLVRN 84          
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_ALHEH (Urease accessory protein ureG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=ureG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.381e-12
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 1
Query:  172 AFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRNG 324
            A  VGIGGPVG+GKTAL+ ALCK LRD Y +A V  D++T+ED EFL RNG
Sbjct:    6 ALRVGIGGPVGSGKTALVEALCKALRDHYEIAVVTNDIYTREDAEFLTRNG 56          
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_PSEU5 (Urease accessory protein ureG OS=Pseudomonas stutzeri (strain A1501) GN=ureG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.110e-12
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRN 321
            N +   VGIGGPVG+GKTAL LALC+ LRD+Y LA V  D++T+ED +FL+RN
Sbjct:    2 NTQPLRVGIGGPVGSGKTALTLALCQALRDRYNLAVVTNDIYTQEDAQFLVRN 54          
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_AZOSB (Urease accessory protein ureG OS=Azoarcus sp. (strain BH72) GN=ureG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.110e-12
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 1
Query:  169 RAFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRN 321
            +A  VGIGGPVG+GKTAL LALC+ LRDKY +A V  D++T ED +FL+RN
Sbjct:    5 QALRVGIGGPVGSGKTALTLALCRALRDKYNIAVVTNDIYTAEDAQFLVRN 55          
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_PSEU2 (Urease accessory protein ureG OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ureG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRN 321
            N +   VGIGGPVG+GKTAL LALC  LRD+Y LA V  D++T+ED +FL+RN
Sbjct:    2 NSQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRN 54          
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_PSE14 (Urease accessory protein ureG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ureG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRN 321
            N +   VGIGGPVG+GKTAL LALC  LRD+Y LA V  D++T+ED +FL+RN
Sbjct:    2 NSQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRN 54          
BLAST of EY691826 vs. ExPASy Swiss-Prot
Match: UREG_PSEFS (Urease accessory protein ureG OS=Pseudomonas fluorescens (strain SBW25) GN=ureG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.305e-12
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYRLAPVPKDVFTKEDGEFLMRN 321
            N +   VGIGGPVG+GKTAL LALC  LRD+Y LA V  D++T+ED +FL+RN
Sbjct:    2 NTQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRN 54          
The following BLAST results are available for this feature:
BLAST of EY691826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
UREG_SORC52.011e-1949.06Urease accessory protein ureG OS=Sorangium cellulo... [more]
UREG_SCHPO2.904e-1843.81Uncharacterized urease accessory protein ureG-like... [more]
UREG_CYTH35.477e-1760.00Urease accessory protein ureG OS=Cytophaga hutchin... [more]
UREG_ANADF1.594e-1651.81Urease accessory protein ureG OS=Anaeromyxobacter ... [more]
UREG_ALHEH2.381e-1266.67Urease accessory protein ureG OS=Alkalilimnicola e... [more]
UREG_PSEU53.110e-1262.26Urease accessory protein ureG OS=Pseudomonas stutz... [more]
UREG_AZOSB3.110e-1264.71Urease accessory protein ureG OS=Azoarcus sp. (str... [more]
UREG_PSEU24.062e-1262.26Urease accessory protein ureG OS=Pseudomonas syrin... [more]
UREG_PSE144.062e-1262.26Urease accessory protein ureG OS=Pseudomonas syrin... [more]
UREG_PSEFS5.305e-1262.26Urease accessory protein ureG OS=Pseudomonas fluor... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-032-H11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691826 ID=EY691826; Name=EY691826; organism=Citrus sinensis; type=EST; length=913bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGACGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAAAAATTTCAATGAAAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACGGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAATACCGTCTTGCACCTGTCCCCAAAGATGTTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGATGCTCTAATTGAAGAAAAGAATACAT
GATGTGAAAAACAGGGGGGAGGGGGGGGTAGCCAAAGAGTCCGTGAAAAA
CATCAGCAATGAATGCAGGAGACCATCCTAGGAGAAACTTATGAAGACAT
TATAAGAGGCGAACCAGCCGTCTTTTGAAGAACGCAAAGAAAGAGTAAAT
TAAGCAGACCTGCCATCCGCGAGAAGCAGTGACAAAACAAGGGATATGTG
ATAACACAAATATGGTCTAATAAGAGGGAGAGAATTAAAAGTGCCAAGCA
AAGACAAAGCCCAGAACACAGAAAAAGAACCATAAACGCGACAACCAGAG
CGGCGGAAGAGAGAGGAGCGGAAGAGGAACGATCGACGGAGAAAAAGGGA
ACGCGAGCGGCAAGGGCAGTGCGATGGAAAATCAATGAACGCATGCACCA
CGGGCTGGGGAAACGAAGAGAGTGCAAATAGACCAATAATCAAACAATAG
CTCGACAATTCGAATACAAAGCCCAAAACGCGTCCGAATAGAAGTTTAGG
AAAAAGAAGAATGAAAAGAATGAATAGAGAAGGAGGAAAATGATAACAAC
CAAAGTGGGAATG
back to top