EY691795

Overview
NameEY691795
Unique NameEY691795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1018
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY691795 vs. ExPASy Swiss-Prot
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.474e-37
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 2 
Query:   92 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVL---QKGRGDGTQVRQM---RIAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMKLAVDKWGRVEVAEPANFSVE 424
            RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K R   +  R     RI ECL+GDETG I+FTARNDQVDLMK G TVILRN++IDMFKG+M+L VDKWGR+E    A+F+V+
Sbjct:   18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVK 134

HSP 2 Score: 34.2686 bits (77), Expect = 4.474e-37
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 3 
Query:  423 KEDNNLSLIEYELVNV 470
            KEDNNLSL+EYEL+NV
Sbjct:  134 KEDNNLSLVEYELINV 149
The following BLAST results are available for this feature:
BLAST of EY691795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4844_ARATH4.474e-3761.54Uncharacterized protein At4g28440 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-032-E07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691795 ID=EY691795; Name=EY691795; organism=Citrus sinensis; type=EST; length=1018bp
CTCTGTCTCTTCCTTCATTCCCAAAATCATTTCGTGTCTCCACTCAGGTT
TTTTAGTTTTGCTGGAAATGGCAGAATCAAAATCAGGATTGAGGAAACCA
GTTTTTACCAAGGTTGATCAGCTACGCCCGGGTACTAGTGGGCACACTCT
CACAGTGAAGGTCGTGAGTACGAAGATGGTATTGCAGAAGGGTCGTGGTG
ATGGAACACAAGTACGTCAGATGCGAATTGCTGAATGCTTGGTTGGTGAT
GAGACAGGAATGATTATCTTTACTGCTAGAAATGATCAAGTGGACCTGAT
GAAAGAGGGTACTACTGTGATTCTGCGCAATGCAAAAATTGACATGTTTA
AAGGATCAATGAAACTTGCTGTGGACAAGTGGGGCCGTGTTGAAGTTGCA
GAGCCTGCCAATTTCAGCGTGGAAGGAAGATAACAACCTCTCTCTGATTG
AATATGAGCTTGTGAATGTTGTAGAAAAAGTGAATTTCAGGAACGGGTTC
ACTTACTCACTGGCAATGTGACCCAAGAATAAAAAGAAATCCAGCTAATC
ATATTACTGTCGTTTATGCGGCATCTCCTGGTCCAAAAACGGGGGTGGCC
TTTAAGAAAAAAAAAAATCTGGGAACCTATACTACCCCAAAAAGGCTTTT
CCTACCGGTGGTGGGCAAACACCAGAAGAACCCCTTTTTAATTGGAACCC
CCAAACAAAAAGGAGAATGGCTCTTAAAATTTAAAAAATTGATAAACAGG
CGGGCAATTTTAAAAAATTGCTCTTGGGATATGATTCGCCAAACCTTTAT
TATTTTTTTAGGATACAACACCCGAGTCTATTGGTGGCTTTTAAACTAAT
AGTTATTTTAAAAATATATATTTTAATTCGCCCGGGGGAAGAATGGTGGT
TGGTCCTTTTATAAATATAAAGAAAAGTGTGGGGGGTTGTGTGGGGGCCC
GGGCTACTTTATCTAAAAACAACGATGAACAAAGTATAAAACGATAGAAA
ATCAAAAAAAATNAGAAA
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