EY691788

Overview
NameEY691788
Unique NameEY691788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691788 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23
Identity = 54/66 (81.82%), Postives = 60/66 (90.91%), Query Frame = 2
Query:    2 IQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYANRSA 199
            IQ+IIRE+FA+CTIISIAHRIPTVMD DRV+V+DAG AKEF  P+RLLERPSLF ALVQEYA RSA
Sbjct: 1449 IQKIIREDFASCTIISIAHRIPTVMDGDRVLVIDAGKAKEFDSPARLLERPSLFAALVQEYALRSA 1514          
BLAST of EY691788 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 52/66 (78.79%), Postives = 58/66 (87.88%), Query Frame = 2
Query:    2 IQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYANRSA 199
            IQ+IIRE+F+ CTIISIAHRIPTVMDCDRV+V+DAG AKE+  P RLLER SLF ALVQEYA RSA
Sbjct: 1472 IQKIIREDFSDCTIISIAHRIPTVMDCDRVLVIDAGKAKEYDSPVRLLERQSLFAALVQEYALRSA 1537          
BLAST of EY691788 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 2
Query:    2 IQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEY 184
            IQRIIREEFA CT+I++AHR+PTV+D D V+V+  G   E+ +PS+L+E  S F  LV EY
Sbjct: 1221 IQRIIREEFADCTVITVAHRVPTVIDSDMVMVLSFGDLVEYNEPSKLMETDSYFSKLVAEY 1281          
BLAST of EY691788 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 2
Query:    2 IQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLE-RPSLFGALVQEYANRSAEL*E 211
            IQ+IIR EF  CT+ +IAHRIPTV+D D V+V+  G   EF  P+RLLE + S+F  LV EY++RS  + E
Sbjct: 1443 IQKIIRTEFEDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPARLLEDKSSMFLKLVTEYSSRSTGIPE 1513          
BLAST of EY691788 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 2
Query:    2 IQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLL-ERPSLFGALVQEY 184
            +Q+ IR EFA CT+I++AHRIPTVMDC  V+ +  G   E+ +P +L+ +  SLFG LV+EY
Sbjct: 1318 LQKTIRREFADCTVITVAHRIPTVMDCTMVLSISDGRIVEYDEPMKLMKDENSLFGKLVKEY 1379          
The following BLAST results are available for this feature:
BLAST of EY691788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
AB4C_ARATH8.585e-2381.82ABC transporter C family member 4 OS=Arabidopsis t... [more]
AB14C_ARATH7.267e-2278.79ABC transporter C family member 14 OS=Arabidopsis ... [more]
AB8C_ARATH8.054e-1357.38ABC transporter C family member 8 OS=Arabidopsis t... [more]
AB5C_ARATH1.163e-1153.52ABC transporter C family member 5 OS=Arabidopsis t... [more]
AB10C_ARATH7.538e-1151.61ABC transporter C family member 10 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-032-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691788 ID=EY691788; Name=EY691788; organism=Citrus sinensis; type=EST; length=906bp
AATTCAAAGGATCATTCGAGAGGAGTTTGCTGCCTGTACAATTATCAGCA
TTGCTCACAGGATACCCACAGTCATGGATTGTGATAGAGTTATAGTTGTT
GATGCAGGATGGGCGAAAGAATTTGGCAAGCCATCCAGGTTGCTTGAGAG
GCCATCACTCTTTGGAGCATTGGTGCAGGAGTACGCCAACCGATCGGCAG
AACTGTAGGAACAAATCCTTTGCACTTGATGTTGGTTGAAAAGAGTTTTC
TGTGATGGAATGCCTATGAGTTTAAGAACCACCTGTGACTGCCATGAAAG
AATCACATTCACTCGCTCAAAAGTTGCAGCAAAGAAACTTCTTCTGAATA
ATGCCATGGAAGTTTAAGTAATAACTCTTCGGCATATTTGCAATTTTGAT
GTCGTAGTCGACAAAATGAGGGAATAGAAAATATTGTGATGTTAGGAACT
GTCAGTGGAACGGTAATTTTAACCCCCCCCCTCAACCTTTTCCGGGGGTA
GAAAAAGGGTTTTTCCTATCCGGGAACCTGTAATGGATAACTCCCATTAG
CAAAACGTTTCTTCTGAAAGTGTATCTGCCTTTGCTTGGTTGCTCTTATA
ACGCATCAAAAGGAATTTCCTGGCCAGCCGATAGAAATAACCGCAAAAGA
AAAAGGGGGGATTTAAAGTTTTTTCCTTAAAGAAAAAAAAAAGAGGGGTG
GGCCGATCTAAATGAATCGCAACTTTAAGATCAGCGTGAAATGTAAAAAA
CAATAAGATCTTCACAATAGGGGCACCCTAGTATGTAGAAATACATGGGC
GATCGAGATTTTTACAACACTGAAGGGGAAGTGCGAAAGTACCGTTGGGG
AAACTTAATCGCTTTCAGGATTACCCTTGAAACCAATTCTAGACCCTATT
TTTTGT
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