EY691787

Overview
NameEY691787
Unique NameEY691787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1044
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB_PSEF5 (Phosphate import ATP-binding protein pstB OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pstB PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 5.217e-30
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = -3
Query:    2 MQHETHSHGINMSALGRDKQSLSLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 205
            MQHE H+HGINMSALGRDKQSLSL QETVAIEVPGLSLYYG+KQAL+DVSMNIPKQRVTAFIGPSGCG
Sbjct:    1 MQHEAHTHGINMSALGRDKQSLSLEQETVAIEVPGLSLYYGEKQALFDVSMNIPKQRVTAFIGPSGCG 68          
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB_PSEPF (Phosphate import ATP-binding protein pstB OS=Pseudomonas fluorescens (strain Pf0-1) GN=pstB PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.899e-30
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = -3
Query:    2 MQHETHSHGINMSALGRDKQSLSLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 205
            MQHETH+HGINMSALGRDKQSL+L +ETVAIEVPGLSL+YG+KQALYDVSMNIPKQRVTAFIGPSGCG
Sbjct:    1 MQHETHTHGINMSALGRDKQSLNLERETVAIEVPGLSLFYGEKQALYDVSMNIPKQRVTAFIGPSGCG 68          
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB_PSEPU (Phosphate import ATP-binding protein pstB OS=Pseudomonas putida GN=pstB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.399e-27
Identity = 57/68 (83.82%), Postives = 65/68 (95.59%), Query Frame = -3
Query:    2 MQHETHSHGINMSALGRDKQSLSLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 205
            MQ ++H+HGI+MSALGR+KQ L LA+ETVAIEVPGLSL+YGDKQAL+DVSMNIPKQRVTAFIGPSGCG
Sbjct:    1 MQQDSHTHGIDMSALGRNKQGLQLAEETVAIEVPGLSLFYGDKQALFDVSMNIPKQRVTAFIGPSGCG 68          
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB2_PSEPK (Phosphate import ATP-binding protein pstB 2 OS=Pseudomonas putida (strain KT2440) GN=pstB2 PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.203e-26
Identity = 56/68 (82.35%), Postives = 65/68 (95.59%), Query Frame = -3
Query:    2 MQHETHSHGINMSALGRDKQSLSLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 205
            MQ ++H+HGI+MSALGR+KQSL +A+ETVAIEVPGLSL+YGDKQAL+DV MNIPKQRVTAFIGPSGCG
Sbjct:    1 MQQDSHTHGIDMSALGRNKQSLRMAEETVAIEVPGLSLFYGDKQALFDVQMNIPKQRVTAFIGPSGCG 68          
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB_PSEAE (Phosphate import ATP-binding protein pstB OS=Pseudomonas aeruginosa GN=pstB PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.587e-24
Identity = 53/68 (77.94%), Postives = 60/68 (88.24%), Query Frame = -3
Query:    2 MQHETHSHGINMSALGRDKQSLSLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 205
            MQ+ET SHGIN  ALGRD+QSL LA E+V +EVPGL+L+YG KQAL+DV MNIPKQRVTAFIGPSGCG
Sbjct:    1 MQNETASHGINFDALGRDRQSLDLASESVELEVPGLNLFYGAKQALFDVRMNIPKQRVTAFIGPSGCG 68          
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB2_PSE14 (Phosphate import ATP-binding protein pstB 2 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pstB2 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.587e-24
Identity = 51/68 (75.00%), Postives = 62/68 (91.18%), Query Frame = -3
Query:    2 MQHETHSHGINMSALGRDKQSLSLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 205
            MQHE+ +HG+NMSAL R KQ L LA ETVAIEVPGL+L+YGDKQAL+D+++NIPKQ+VT+FIGPSGCG
Sbjct:    1 MQHESPTHGMNMSALRRHKQRLDLADETVAIEVPGLNLFYGDKQALFDIALNIPKQKVTSFIGPSGCG 68          
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB2_PSESM (Phosphate import ATP-binding protein pstB 2 OS=Pseudomonas syringae pv. tomato GN=pstB2 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.730e-23
Identity = 50/68 (73.53%), Postives = 61/68 (89.71%), Query Frame = -3
Query:    2 MQHETHSHGINMSALGRDKQSLSLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 205
            MQHE  +HG+N+ AL R KQ L LA+ETVAIEVPGLSL+YGDKQAL+D+++NIPKQ+VT+FIGPSGCG
Sbjct:    1 MQHERPTHGMNIPALRRRKQVLDLAEETVAIEVPGLSLFYGDKQALFDIALNIPKQKVTSFIGPSGCG 68          
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB2_PSEU2 (Phosphate import ATP-binding protein pstB 2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pstB2 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.797e-22
Identity = 49/68 (72.06%), Postives = 61/68 (89.71%), Query Frame = -3
Query:    2 MQHETHSHGINMSALGRDKQSLSLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 205
            MQHE+ + G+NMSAL R KQ L LA E+VAIEVPGL+L+YGDKQAL+D+++NIPKQ+VT+FIGPSGCG
Sbjct:    1 MQHESPTSGMNMSALRRHKQRLDLADESVAIEVPGLNLFYGDKQALFDIALNIPKQKVTSFIGPSGCG 68          
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB_HAHCH (Phosphate import ATP-binding protein pstB OS=Hahella chejuensis (strain KCTC 2396) GN=pstB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.128e-15
Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = -3
Query:    2 HREHPMQHETH-SHGINMSALGRDKQSLSLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 220
            + E P     H SHGI++SA+ R  + LS+  ET+A+EV  L L+YG+K+AL+ + ++IP++RVTAFIGPSGCG
Sbjct:   12 NEEQPFNESKHRSHGIDISAIERSMEDLSIDNETIALEVNKLKLFYGEKEALHGIDLSIPQKRVTAFIGPSGCG 85          
BLAST of EY691787 vs. ExPASy Swiss-Prot
Match: PSTB_IDILO (Phosphate import ATP-binding protein pstB OS=Idiomarina loihiensis GN=pstB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.252e-11
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = -3
Query:    2 INMSALGRDKQSL-SLAQETVAIEVPGLSLYYGDKQALYDVSMNIPKQRVTAFIGPSGCG 178
            +N S    +K  L +L  E  A+++  L LYYG+ QALYD+SM IP  RVTAFIGPSGCG
Sbjct:    4 VNPSTSNLEKLDLHNLPAEQTALDIKNLDLYYGEDQALYDISMRIPNNRVTAFIGPSGCG 63          
The following BLAST results are available for this feature:
BLAST of EY691787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PSTB_PSEF55.217e-3092.65Phosphate import ATP-binding protein pstB OS=Pseud... [more]
PSTB_PSEPF8.899e-3091.18Phosphate import ATP-binding protein pstB OS=Pseud... [more]
PSTB_PSEPU5.399e-2783.82Phosphate import ATP-binding protein pstB OS=Pseud... [more]
PSTB2_PSEPK1.203e-2682.35Phosphate import ATP-binding protein pstB 2 OS=Pse... [more]
PSTB_PSEAE5.587e-2477.94Phosphate import ATP-binding protein pstB OS=Pseud... [more]
PSTB2_PSE145.587e-2475.00Phosphate import ATP-binding protein pstB 2 OS=Pse... [more]
PSTB2_PSESM4.730e-2373.53Phosphate import ATP-binding protein pstB 2 OS=Pse... [more]
PSTB2_PSEU21.797e-2272.06Phosphate import ATP-binding protein pstB 2 OS=Pse... [more]
PSTB_HAHCH2.128e-1551.35Phosphate import ATP-binding protein pstB OS=Hahel... [more]
PSTB_IDILO9.252e-1155.00Phosphate import ATP-binding protein pstB OS=Idiom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-032-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691787 ID=EY691787; Name=EY691787; organism=Citrus sinensis; type=EST; length=1044bp
TGCCGCAACCGGACGGACCGATGAAGGCGGTCACGCGCTGCTTCGGGATG
TTCATGCTGACGTCATACAGCGCCTGCTTGTCACCGTAGTAAAGGCTCAG
GCCAGGGACTTCGATGGCCACGGTTTCCTGGGCCAGGCTCAGGCTCTGCT
TGTCGCGACCCAGGGCTGACATGTTGATGCCGTGGGAATGGGTTTCATGT
TGCATGGGATGCTCCCTGTGCTACCAATTCGTTTCGTTGAACCGCCGGGG
CGGCTTACTCAAAATCTGTGTCTACCGCTAACCCTGTGGGTATTTACTTT
ATTAAAGTAATATAGGATATGTATACGAATTAAAATAATGACTTAATAAA
GATTTATTAATTAAACGAAACAATATAAAAAAAGATATACAATCGGACGT
CAAATAACACACAAACAAGAAATTGGGGGGGGGGGGGGAATAGATCAAAT
ATATAAAATTAGAGCAAAAAAATAAAAGCAAATTAAAGATATGTTTATCT
CCCGCAAAAAATCGTATCATTAATAACGCGAAAATTATAATCACCCTATT
GATACTTTTCGTGATAAAACTACAATTTCTTGATAGATTGTAAATGTAAA
AAAAGAGACTAATTAAGACTGTAGAGAAAATAAAAGTTATATGAGGATAT
GACATATATCATTGTGAAAATAAAATACTAGTGACAATAACGAACGAAAT
TATTAGAGAGTGTAAACCATACGGTCCAAGACGAAAGAACGAGATGAGAG
ACAGACAATGAACTAGAGATTAAAATTGTAGTACTAATGGAATAATTACT
AATTCATACAATGATAACTGGAACCAGTAAACAAAAACCACCCAGACTAA
CGAAAACATTTATAAACACAAAGAATATAAACCTAGACAAGAAAGAAAAA
ATCAAAGTCATGGAACCATATGAATAATAGACGCAGGGATCAAAAATATT
ATATGAGCAGATATTTGAGAATGGATTAATAGGAAGAAAGATGAAGATAA
CTAAGAAAGCACACTTTAAAACGAATAAATGTTAATTGACTATA
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