EY691583

Overview
NameEY691583
Unique NameEY691583
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691583 vs. ExPASy Swiss-Prot
Match: CP12_CHLRE (Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii GN=cp12 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.283e-15
Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 3 
Query:   66 ISEKVEQSIKSAEEACEGDPASGECAAAWDEVEELSAAASHARERKKD----SDPLEAYCKDNPETDECRTYED 275
            +++KV+ ++K AE+AC     S +CA AWD VEELSAA SH ++  K     +DPLEA+CKD P+ DECR YED
Sbjct:    8 LNKKVQDAVKEAEDAC-AKGTSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 80
The following BLAST results are available for this feature:
BLAST of EY691583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CP12_CHLRE4.283e-1552.70Calvin cycle protein CP12 OS=Chlamydomonas reinhar... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-108-E10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691583 ID=EY691583; Name=EY691583; organism=Citrus sinensis; type=EST; length=972bp
TGCGCTCGACCCACGCGTCCGCAGGGCGCATGCACATGCAACCCCTGAGA
GCTGCTCCCGATAGAATCTCAGAGAAGGTGGAGCAAAGCATCAAGAGTGC
AGAGGAGGCGTGCGAGGGGGACCCTGCTAGTGGCGAGTGTGCTGCTGCAT
GGGACGAGGTGGAGGAGCTGAGTGCCGCGGCCAGCCATGCTAGAGAGAGG
AAGAAGGATTCCGATCCTTTGGAGGCTTACTGTAAGGACAACCCAGAGAC
CGATGAGTGCCGCACTTATGAAGATTGATAACATCGTCGTTATGCTCTTT
TAATTATGTTTTTTTTTTCTCCTTTTTAAGTCCTTGGATGTTGTTATGCG
ATGCGATCGTGATGCGTTGGGCAGCCTGACCTCCGCATGCGACCAAAGCA
TACGCGGACGCGAGGGGCGGGCAGCGCGTCGGGGCTCAGGGGGGGAAAAG
ACGAACGGGACGCGTGGGTGGCGGGGTGGGCCCCCCCCGCGGCCGCCGCC
GGGCGGCCCCCCGCCCCGCAACGCGCGCCCCGCCTGCGCCGAGCCTTCCC
CGAAAGCGCAACGCGCGGACGCGCGCGCTGCCGCGGGCACGCTCCCCCGC
CGCGCGCCGCGCCCCGCCCGCCTGCCCCCGCCGGGCGGGCGGGGGGGGGG
GCGCCGCGCGGACGCCGCGCGGGCCGGGCGCCGGGTCCCGGGCGGCGGGC
CGCGGCCCGCGCCGGCCCGCCGCGCGGGCTGCCCTCACGAACAGCTCATC
CCCACCAGCACAGGAGGCCGCCTAGCCCGCCAGCCCCGAGTGGGCGACAC
CCGCCCCGGCCGGCGTGCCACCGCCGCCGGCGGCCCCCGGCGCCGGCGCC
GACCCGGCGGGGCGCACCGCTGCCGGCGGCACCGCGGAGCGTGCGGCNNC
GCCGCNANCGNCCCCCACCACGCCCCGGACGCGAGGCGCGCGGGGCGCGG
GCGGGCTGGGGTCGCGTGGCGG
back to top