EY691560

Overview
NameEY691560
Unique NameEY691560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY691560 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.675e-39
Identity = 94/169 (55.62%), Postives = 116/169 (68.64%), Query Frame = 1 
Query:   79 VSMAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLXXXXXXXXXXXX-IKQVSES--RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAIENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIGALKKKIAGTE 576
            +S+AA++  AV+ PRVP+ +T       C A+P L             +K VS +  ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSSRKELA DI +LKKKIAG+E
Sbjct:    3 ISVAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY691560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH1.675e-3955.62Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-108-C04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691560 ID=EY691560; Name=EY691560; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGGACGCGTGGGACCAAACCAAGCATTACAAATCGAAAA
GAAAAAGAAAGAACACCACAAATCAAAAGTATCAATGGCAGCGACGGCGT
ACGCGGCGGTGTTAACTCCACGTGTCCCCTCAACCACCACCGTCAAAGTC
AAATCTTCTCACTGCTTTGCTCTTCCCTGCCTCCCTCCTCGTTCGTCAAC
GCCACCATTCTCTTCTTCCATTAAACAAGTTTCAGAGTCGAGAAGGTTTC
CTTTGCTTCAGGTTAGAGCCTCTTCCTCAGAAGAGACATCCACAGTTGAT
GCAGATGAACTTTTTTCAGACTTGAAGGAAAAGTGGGATGCCATTGAAAA
CAAGTCCACGGTACTTCTCTATGGAGGTGGGGCAATAGTGGCTGTTTGGT
TATCCTCAACTATTGTTGGTGCCATCAATTCAGTGCCTTTGCTTCCCAAA
CTCTTGGAGTTGATTGGACTTGGTTATACTGGATGGTTTGTCTACAGATA
CCTTCTCTTCAAGTCAAGCAGAAAAGAACTAGCCACGGATATTGGAGCAC
TGAAGAAGAAGATTGCTGGAACTGAATAGATTGTACATTCTGGAAGCAAT
TCATGTTTGGCCCTGATAGTCATTTATTTTGGTCCTCTATCATTGCATAT
GAGGCACTTGGATCCTGGGAAGAAAGGTGCGGTACGGATCGGTGTATTCC
CTGAGTTATACCAAAATATCGCCGGGAAAAAAAAAGTTGGACAAAGCGAA
TGTGTCTAGCCCGAGCACGAATTGGTGCGGGGGGGTGAAAATGCGAAAAG
GAAGGTGCGCTGTTTGTCGGCGGAGAGAGGAGAAGACGCAGGAGAAAAAG
GAAAAACCAAATAAAGCAAGCTGAGATAAGAAGGAAAC
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