EY691509

Overview
NameEY691509
Unique NameEY691509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691509 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 2 
Query:   14 FMKFEDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 139
            F+KFED+S+ SSSQGG TS G VPVP+LPRL EKV +SMFFC
Sbjct:  870 FLKFEDMSDASSSQGGHTSVGSVPVPELPRLHEKVRSSMFFC 911
The following BLAST results are available for this feature:
BLAST of EY691509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AGO4B_ORYSJ7.008e-1173.81Protein argonaute 4B OS=Oryza sativa subsp. japoni... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-110-E12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691509 ID=EY691509; Name=EY691509; organism=Citrus sinensis; type=EST; length=866bp
CCACGCGTCCGCATTCATGAAGTTCGAAGACTTATCAGAGACATCTTCTA
GCCAGGGTGGGATGACATCTGCTGGACCTGTTCCTGTCCCCCAGCTGCCT
AGACTGCAGGAGAAAGTGTGCAATTCAATGTTCTTCTGTTGAGACACTTG
TGTGGCTTCTACCGTCAATCAGAATCCTATCAAAGTAGTTTGTATATAGT
TAGCCTTTTGGTTTTCATCTGGACCATCCAGTGGCAAAGGTGTCTAGAAC
TTGTAGTGATGCCTTGAAAATCTCTGCTATTTAATTTTAGGTCTAGAAAC
CGAAAGTGCCCTGTGCCTTTGTTTTTGTGGTGATTACTGGTGTTGTTGAC
TCTTGCCAGTCCCATGCATTCGCCAGTCTCTCTATTTCCCCAGACAGCGA
TGGGCTGTTAAACTGTTATTTTGATGGATTCAGGCATTCGGGTATCGGAA
ATTGGAATGATTGGCATGTTTTTAGTAANGCACACAAAAAAAAGAAAGCG
AAAAAACGAACCCACGAGAGACGCACCAACAACCAAGACCAAACGAACAA
AAAAAAAAACAACCCAAAGCACAAACCACCCCCAGCCAGGGGGGCGGCCC
TCTCAAAAGGACCCATTTTTATGGACGCGGGGTGTGCAAAATCATCTTTT
TATTAAGGGACCCCAAAAACTCATTCCCGGGCCCGGCTTTTACCAACGCA
CGCAACTGGAAAACCCCTGGCTGTCCCACAACCAAAACCTCCAGGGGAAC
CACCCCCCTTTTCTGCAGGGGGCCGCATAAAACAAAAAAGCCCCCGCGCG
CACTCACCCTCTAGCAAGAGCGGCCGCGGACCTATAATGGGGACAAACAG
ACACCACGCTCACTCC
back to top