EY690154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 1.849e-35 Identity = 80/106 (75.47%), Postives = 84/106 (79.25%), Query Frame = 2 Query: 11 VRGPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKRSRL 328 +RGPKRAS IRKLFNL KEDDVRKYVNTYRRTFT K GKKVSKAPKIQRLVTPLTLQRKRARI+ LLA+RLKEQR+RRSESLAKKRSRL Sbjct: 134 MRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRL 239
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.198e-34 Identity = 79/106 (74.53%), Postives = 83/106 (78.30%), Query Frame = 2 Query: 11 VRGPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKRSRL 328 +RGPKRAS IRKLFNLSKEDDVRKYVNTYRRTFT K GK SKAPKIQRLVTPLTLQRKRARI+ LLA+RLKEQR+RRSESLAKKRSRL Sbjct: 134 MRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKIQRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRL 239
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.325e-33 Identity = 77/106 (72.64%), Postives = 82/106 (77.36%), Query Frame = 2 Query: 11 VRGPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKRSRL 328 +RGPKRAS IRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKIQRLVTPLTLQRKRARI+ LLA+RLKEQR+RRSESLAKKRSRL Sbjct: 134 MRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRL 239
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.286e-20 Identity = 64/106 (60.38%), Postives = 70/106 (66.04%), Query Frame = 2 Query: 11 VRGPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKRSRL 328 +RGP+ L+ KEDDVRKYVNT FTTK K SKAPKIQRLVTPLTLQRKRARI+ LLA+RLKEQRE+RSESLAKKRSRL Sbjct: 89 MRGPREPQRSEALY--FKEDDVRKYVNTTAE-FTTKW--KGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQREKRSESLAKKRSRL 189
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS6_ICTPU (40S ribosomal protein S6 OS=Ictalurus punctatus GN=rps6 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.422e-19 Identity = 56/101 (55.45%), Postives = 64/101 (63.37%), Query Frame = 2 Query: 17 GPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKR 319 GPKRAS IRKLFNLSKEDDVR+YV RR T + K +KAPKIQRLVTP LQ KR RI+ LLA RLKE +E+R E +AK+R Sbjct: 134 GPKRASRIRKLFNLSKEDDVRQYV--VRRPLTKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKRQRTQKNKDEAAEYAKLLAKRLKEAKEKRQEKIAKRR 232
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS6_APLCA (40S ribosomal protein S6 OS=Aplysia californica GN=RPS6 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.058e-19 Identity = 58/103 (56.31%), Postives = 67/103 (65.05%), Query Frame = 2 Query: 17 GPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKRS 322 GPKRAS IRKLFNLSKEDDVR+YV RR + GKK SKAPKIQRLVTP+ LQRKRAR++ LLA R+KE +ER+ E +KRS Sbjct: 134 GPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKKAKSKAPKIQRLVTPVVLQRKRARMALKKKRVTKKREDHAEYTKLLAQRMKEAKERKME---RKRS 231
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS6_ONCMY (40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.204e-18 Identity = 53/101 (52.48%), Postives = 64/101 (63.37%), Query Frame = 2 Query: 17 GPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKR 319 GPKRAS IRKLFNL+KEDDVR+YV RR T + K +KAP+IQRLVTP LQ KR RI+ LLA R+KE +E+R E +AK+R Sbjct: 134 GPKRASKIRKLFNLAKEDDVRQYV--VRRPLTKEGKKPRTKAPRIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRMKEAKEKRQEQIAKRR 232
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS6_RAT (40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.054e-18 Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 17 GPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKR 319 GPKRAS IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RI+ LLA R+KE +E+R E +AK+R Sbjct: 134 GPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS6_MOUSE (40S ribosomal protein S6 OS=Mus musculus GN=Rps6 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.054e-18 Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 17 GPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKR 319 GPKRAS IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RI+ LLA R+KE +E+R E +AK+R Sbjct: 134 GPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232
BLAST of EY690154 vs. ExPASy Swiss-Prot
Match: RS6_MACFA (40S ribosomal protein S6 OS=Macaca fascicularis GN=RPS6 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.054e-18 Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 17 GPKRAS*IRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISXXXXXXXXXXXXXXXXXXLLATRLKEQRERRSESLAKKR 319 GPKRAS IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RI+ LLA R+KE +E+R E +AK+R Sbjct: 134 GPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232 The following BLAST results are available for this feature:
BLAST of EY690154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >EY690154 ID=EY690154; Name=EY690154; organism=Citrus sinensis; type=EST; length=560bpback to top |