EY688688

Overview
NameEY688688
Unique NameEY688688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688688 vs. ExPASy Swiss-Prot
Match: YNEN_BACSU (Thioredoxin-like protein yneN OS=Bacillus subtilis GN=yneN PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 3
Query:  198 EKGTHLPDITLRNANGETVQLADYKGGPLVINLWATWCPPCRREMPVLESAQRQRPD----VTFLFVNQAESMQSVATYLATQGL 440
            ++G   PD +L+  +GE   L D KG  +++N WATWC PCR+EMP +E  Q++  D    V   F +  +S + V  +  T  L
Sbjct:   34 QEGQQAPDFSLKTLSGEKSSLQDAKGKKVLLNFWATWCKPCRQEMPAMEKLQKEYADKLAVVAVNFTSAEKSEKQVRAFADTYDL 118          
BLAST of EY688688 vs. ExPASy Swiss-Prot
Match: TLPA_BRAJA (Thiol:disulfide interchange protein tlpA OS=Bradyrhizobium japonicum GN=tlpA PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 3
Query:  183 SLTLYEKGTHLPDITLRNANGETVQLADYKGGPLVINLWATWCPPCRREMPVLESAQ 353
            +LT+      LPD+   +A+G+  +L+D++G  L++NLWATWC PCR+EMP L+  Q
Sbjct:   65 ALTMASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQ 121          
BLAST of EY688688 vs. ExPASy Swiss-Prot
Match: RESA_BACSU (Thiol-disulfide oxidoreductase resA OS=Bacillus subtilis GN=resA PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11
Identity = 34/125 (27.20%), Postives = 63/125 (50.40%), Query Frame = 3
Query:  120 LRKPLSAGVITGLAFWALTSLSLTLYE----------KGTHLPDITLRNANGETVQLADYKGGPLVINLWATWCPPCRREMPVLESAQR--QRPDVTFLFVNQAESMQSVATYLATQGLNLDNVL 458
            ++K     + TG+    + +L  T+Y           +G+  P+  L + NG+ ++L+D KG  + +N W TWC PC++E P + +  +  +   V  + VN  ES  +V  ++ + G+N   VL
Sbjct:    1 MKKKRRLFIRTGILLVLICALGYTIYNAVFAGKESISEGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVL 125          
The following BLAST results are available for this feature:
BLAST of EY688688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YNEN_BACSU7.716e-1136.47Thioredoxin-like protein yneN OS=Bacillus subtilis... [more]
TLPA_BRAJA7.716e-1145.61Thiol:disulfide interchange protein tlpA OS=Bradyr... [more]
RESA_BACSU7.716e-1127.20Thiol-disulfide oxidoreductase resA OS=Bacillus su... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-D01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688688 ID=EY688688; Name=EY688688; organism=Citrus sinensis; type=EST; length=467bp
CTGCACCGCAGTACGGTCCGGATTCCCGGGTCGACCTGCGGGACGGCGGT
TTTCTCGCCTGGCCCGGCGTTATCGCGCTGATCCTCGGCGCCCTGATCTA
CGGCTGGCGCCGCCCGCTGCTGCGCAAGCCCCTGAGCGCAGGCGTGATCA
CCGGCCTCGCGTTCTGGGCCCTGACCAGCCTGTCCCTGACCCTCTACGAA
AAAGGCACGCACCTGCCGGACATCACCCTGCGCAACGCCAATGGCGAAAC
CGTGCAACTGGCCGACTACAAGGGCGGCCCGCTGGTGATCAATCTGTGGG
CCACCTGGTGCCCGCCGTGCCGGCGCGAAATGCCGGTACTGGAAAGTGCC
CAGCGCCAACGCCCGGACGTGACCTTCCTGTTCGTCAACCAGGCCGAAAG
CATGCAAAGCGTCGCCACCTACCTGGCGACCCAGGGCCTGAACCTGGACA
ACGTGCTGTTCGACGCC
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