EY688657

Overview
NameEY688657
Unique NameEY688657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688657 vs. ExPASy Swiss-Prot
Match: HTH_ARATH (Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.116e-47
Identity = 103/195 (52.82%), Postives = 125/195 (64.10%), Query Frame = 3
Query:    3 RTPEAIPYAIENMKALDDPAFIGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGXXXXXXXXXXXXXXXXXY-ESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRNVGVTILSEKLRGNGA 584
            R PEA    I   K     AF G FILEK+  P+S GHL L   N +DNPSVTFNYFK P DLQRCV+                    +  +V  +++++  A +NL P+  N + S+ QFC+DTV+TIWHYHGGC VGKVV  + KVLGVD LRVIDGSTF  SPGTNPQAT+MM+GR +GV IL E+L GN A
Sbjct:  399 RRPEATQAYITRNKYQLHEAFNGSFILEKLAYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDKQNVHKMLSLSVKANINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMGRYMGVKILRERL-GNKA 592          
BLAST of EY688657 vs. ExPASy Swiss-Prot
Match: MDL1_PRUSE ((R)-mandelonitrile lyase 1 OS=Prunus serotina GN=MDL1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.827e-29
Identity = 67/161 (41.61%), Postives = 91/161 (56.52%), Query Frame = 3
Query:   87 KVMGPVSTGHLELRTR-NPNDNPSVTFNYFKEPEDLQRCVQGXXXXXXXXXXXXXXXXXYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRNVGVTILSEK 566
            KV GP+S G L L++  N   +P+V FNY+  P DL  CV G                  E +      N+        LP+      + E FCR++V + WHYHGGC VGKV+D D++V G+DALRV+DGSTF Y+P ++PQ   +MLGR VG+ IL E+
Sbjct:  388 KVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNPTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGIEGFNILGIP----LPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGIDALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQER 544          
BLAST of EY688657 vs. ExPASy Swiss-Prot
Match: MDL4_PRUSE ((R)-mandelonitrile lyase 4 OS=Prunus serotina GN=MDL4 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.032e-26
Identity = 64/164 (39.02%), Postives = 92/164 (56.10%), Query Frame = 3
Query:   78 ILEKVMGPVSTGHLELRTR-NPNDNPSVTFNYFKEPEDLQRCVQGXXXXXXXXXXXXXXXXXYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRNVGVTILSEK 566
            I+ KV GP+S G L L++  N +  P+V FNY  +P DL  CV G                  + +      N+  +     LP +     + E+FCRDTV + WHYHGG  VGKV+D +++V G++ALRV+DGSTF  +P ++PQ   +MLGR VG  I+ E+
Sbjct:  387 IVSKVPGPLSAGSLTLQSSSNVSVAPNVKFNYCSDPVDLTHCVSGMKKIGVFLSTDALKPYKVDDLPGIDGFNILGTP----LPENQTDDAAFEKFCRDTVASYWHYHGGAIVGKVIDGNFRVTGINALRVVDGSTFPATPASHPQGFYLMLGRYVGTKIVQER 546          
BLAST of EY688657 vs. ExPASy Swiss-Prot
Match: MDL2_PRUSE ((R)-mandelonitrile lyase 2 OS=Prunus serotina GN=MDL2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.965e-25
Identity = 66/176 (37.50%), Postives = 95/176 (53.98%), Query Frame = 3
Query:   78 ILEKVMGPVSTGHLELR-TRNPNDNPSVTFNYFKEPEDLQRCVQGXXXXXXXXXXXXXXXXXYESMSVPILVNM-TASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRNVGVTILSEKLRGNGAKQRQS 599
            I+ KV GP+S G + L+ T +    P+VTFNY+    DL  CV G                 Y+   +P +        P   LP +     + E FCR+ V + WHYHGGC VG+V+D D++V G++ALRV+DGSTF  +P ++PQ   +MLGR +G  IL E+L    A  + +
Sbjct:  387 IVNKVPGPLSHGTVLLQSTSDVRVAPNVTFNYYSNTTDLAHCVSG--MKKIGEFLSSDALKPYKVEDLPGIEGFDILGIP---LPENQTDDAAFETFCREAVASYWHYHGGCLVGEVLDDDFRVTGINALRVVDGSTFPSTPASHPQGFYLMLGRYMGTKILQERLASEEALHKST 557          
BLAST of EY688657 vs. ExPASy Swiss-Prot
Match: MDL3_PRUSE ((R)-mandelonitrile lyase 3 OS=Prunus serotina GN=MDL3 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.664e-24
Identity = 61/164 (37.20%), Postives = 88/164 (53.66%), Query Frame = 3
Query:   78 ILEKVMGPVSTGHLELRTRNP-NDNPSVTFNYFKEPEDLQRCVQGXXXXXXXXXXXXXXXXXYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRNVGVTILSEK 566
            I+ KV GP+S G + L + +     P+V FNY+    DL  CV G                  E +      N+        LP +     + E FCR++V + WHYHGGC VGKV+D  ++V G++ALRV+DGSTF  +P ++PQ   +MLGR +G+ IL E+
Sbjct:  386 IVNKVPGPLSHGTVTLNSSSDVRVGPNVKFNYYSNLTDLSHCVSGMKKLGEVLSTDALEPYKVEDLPGIDGFNILGIP----LPENQTDDAAFETFCRESVASYWHYHGGCLVGKVLDDGFRVTGINALRVVDGSTFPSTPASHPQGFYLMLGRYMGIQILQER 545          
BLAST of EY688657 vs. ExPASy Swiss-Prot
Match: MDL1_PRUDU ((R)-mandelonitrile lyase 1 OS=Prunus dulcis GN=MDL1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22
Identity = 61/165 (36.97%), Postives = 86/165 (52.12%), Query Frame = 3
Query:   78 ILEKVMGPVSTGHLELRTRNP-NDNPSVTFNYFKEPEDLQRCVQGXXXXXXXXXXXXXXXXXYESMSVPILVNMT-ASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRNVGVTILSEK 566
            I+ +V GP+S G + L + +     P++ FNY+    DL  CV G                 Y++  V  +        P   LP +     S E FC D V + WHYHGG  VGKV+D  ++V+G+ ALRV+D STF Y P ++PQ   +MLGR VG+ IL E+
Sbjct:  386 IVSQVPGPLSHGSVTLNSSSDVRIAPNIKFNYYSNSTDLANCVSG--MKKLGDLLRTKALEPYKARDVLGIDGFNYLGVP---LPENQTDDASFETFCLDNVASYWHYHGGSLVGKVLDDSFRVMGIKALRVVDASTFPYEPNSHPQGFYLMLGRYVGLQILQER 545          
The following BLAST results are available for this feature:
BLAST of EY688657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
HTH_ARATH3.116e-4752.82Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=... [more]
MDL1_PRUSE3.827e-2941.61(R)-mandelonitrile lyase 1 OS=Prunus serotina GN=M... [more]
MDL4_PRUSE3.032e-2639.02(R)-mandelonitrile lyase 4 OS=Prunus serotina GN=M... [more]
MDL2_PRUSE1.965e-2537.50(R)-mandelonitrile lyase 2 OS=Prunus serotina GN=M... [more]
MDL3_PRUSE1.664e-2437.20(R)-mandelonitrile lyase 3 OS=Prunus serotina GN=M... [more]
MDL1_PRUDU1.557e-2236.97(R)-mandelonitrile lyase 1 OS=Prunus dulcis GN=MDL... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-090-H04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688657 ID=EY688657; Name=EY688657; organism=Citrus sinensis; type=EST; length=799bp
AAAGGACCCCAGAGGCTATACCCTATGCAATTGAAAACATGAAAGCACTT
GATGATCCAGCTTTCATAGGCGGATTCATTCTCGAAAAGGTTATGGGCCC
AGTATCCACGGGACATTTGGAGCTCCGAACCCGAAACCCGAACGATAACC
CGTCCGTCACGTTCAATTACTTCAAGGAACCTGAAGACTTACAAAGATGT
GTACAGGGCATTTCAACCATAGAGAAAATAATTGAATCAAAATCTTTTTC
TAAGTTTAAATACGAGAGTATGTCAGTGCCAATACTGGTAAACATGACTG
CCAGTGCCCCGGTCAATTTGCTGCCCAGACACAGCAATGCATCAACATCA
CTGGAACAATTTTGCAGGGACACAGTGATGACCATATGGCATTATCATGG
AGGTTGCCAAGTTGGTAAGGTTGTTGATCATGATTATAAGGTTCTTGGGG
TCGATGCATTGAGGGTCATCGACGGATCCACGTTTTATTACTCCCCGGGG
ACTAATCCGCAAGCAACGGTCATGATGCTTGGAAGGAACGTGGGAGTCAC
GATTCTGAGTGAAAAACTTAGGGGTAACGGTGCAAAGCAACGACAATCAT
GAATAATAAAATAATGCTCCTTTGGATTTAACAGAAAGCGTTCATGCCGA
CCGCGGGCAAGAGGAGAACACCGGGGGGGACAGCCTAACAGACCCGACGA
CGCCCCCAACAGGAAAGAAAGGAGACGAACTAACCCACAGGAGAGCAGGA
CACAAAGCCCCCGCCGGCCATGCACAAACGGCGCCTGCACCCAGCGAAC
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