EY746559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RSP40_ARATH (Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis thaliana GN=RSP40 PE=1 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 8.233e-68 Identity = 131/196 (66.84%), Postives = 154/196 (78.57%), Query Frame = 1 Query: 97 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRALDATNMSKLTDRVISVGILQFVMNDD--RRNGHRPD*KIVIGPPKRGR 678 M+P+FCGNFEYDAR+ DLERLFR+YGKV+RVDMK+GFAF+YM+DERDAEDAIR LDR EFGRKGRRLRVEWTK E ++ RPSKTLFVINFD +TRTRDLE+HFEPYGKI++VRIRRNFAF+QYE QEDATRALDA+N SKL D+VISV ++ + DD R NGH P+ + P +R R Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSE-RGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISV---EYAVKDDDARGNGHSPERRRDRSPERRRR 192
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RSP41_ARATH (Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis thaliana GN=RSP41 PE=1 SV=2) HSP 1 Score: 256.529 bits (654), Expect = 1.834e-67 Identity = 130/196 (66.33%), Postives = 154/196 (78.57%), Query Frame = 1 Query: 97 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRALDATNMSKLTDRVISVGILQFVMNDD--RRNGHRPD*KIVIGPPKRGR 678 M+P+FCGNFEYDAR+SDLERLFR+YGKV+RVDMK+GFAF+YM+DERDAEDAIR LDR E+GR GRRLRVEWTK++ + RPSKTLFVINFD +TRTRDLERHFEPYGKI++VRIRRNFAF+QYE QEDATRALDATN SKL D+VISV ++ + DD R NG+ P+ + P +R R Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKND--RGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISV---EYAVKDDDSRGNGYSPERRRDRSPDRRRR 191
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RSP31_ARATH (Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis thaliana GN=RSP31 PE=1 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 3.588e-55 Identity = 109/184 (59.24%), Postives = 134/184 (72.83%), Query Frame = 1 Query: 97 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRALDATNMSKLTDRVISVGILQFVMND----DRRNGHR 636 MRP+F GNFEY+ RQSDLERLF +YG+VDRVDMKSG+AF+Y +DERDAEDAIR LD FG + RRL VEW K E +N +P+KTLFVINFDP T+ D+E+HFEPYGK+ +VRIRRNF+FVQ+E QEDAT+AL+AT SK+ DRV+SV ++ + D D RNG R Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGYEKRRLSVEWAKGE-----RGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSV---EYALKDDDERDDRNGGR 176
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RSP3_CAEEL (Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 4.153e-11 Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 106 IFCGNFEYDARQSDLERLFRRYGKVDRVDMKSG----FAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTK 315 ++ GN D R+ ++E +F +YG++ VD+KSG FAF+ +D RDAEDA+R D EF GRR+RVE+T+ Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEF--DGRRIRVEFTR 82
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RBM4_MACFA (RNA-binding protein 4 OS=Macaca fascicularis GN=RBM4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.153e-11 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 97 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRAL 543 M +F GN +A + ++ LF +YGKV D+ + F++++D+ AEDAIR L + G + VE +K++ ++ S L V N P T ++L FE YG +I I +++AFV E EDA A+ Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLH--HYKLHGVNINVEASKNK------------------SKTSTKLHVGNISPTCT-NKELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAI 128
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RBM4_HUMAN (RNA-binding protein 4 OS=Homo sapiens GN=RBM4 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.153e-11 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 97 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRAL 543 M +F GN +A + ++ LF +YGKV D+ + F++++D+ AEDAIR L + G + VE +K++ ++ S L V N P T ++L FE YG +I I +++AFV E EDA A+ Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLH--HYKLHGVNINVEASKNK------------------SKTSTKLHVGNISPTCT-NKELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAI 128
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RBM4_BOVIN (RNA-binding protein 4 OS=Bos taurus GN=RBM4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.153e-11 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 97 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRAL 543 M +F GN +A + ++ LF +YGKV D+ + F++++D+ AEDAIR L + G + VE +K++ ++ S L V N P T ++L FE YG +I I +++AFV E EDA A+ Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLH--HYKLHGVNINVEASKNK------------------SKTSTKLHVGNISPTCT-NKELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAI 128
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RBM4_RABIT (RNA-binding protein 4 OS=Oryctolagus cuniculus GN=RBM4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.424e-11 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 97 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRAL 543 M +F GN +A + ++ LF +YGKV D+ + F++++D+ AEDAIR L + G + VE +K++ ++ S L V N P T ++L FE YG +I I +++AFV E EDA A+ Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLH--HYKLHGVNINVEASKNK------------------SKASTKLHVGNISPTCT-NQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAI 128
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RBM4_MOUSE (RNA-binding protein 4 OS=Mus musculus GN=Rbm4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.424e-11 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 97 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRAL 543 M +F GN +A + ++ LF +YGKV D+ + F++++D+ AEDAIR L + G + VE +K++ ++ S L V N P T ++L FE YG +I I +++AFV E EDA A+ Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLH--HYKLHGVNINVEASKNK------------------SKASTKLHVGNISPTCT-NQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAI 128
BLAST of EY746559 vs. ExPASy Swiss-Prot
Match: RBM4B_RAT (RNA-binding protein 4B OS=Rattus norvegicus GN=Rbm4b PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 5.424e-11 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 97 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRAL 543 M +F GN +A + ++ LF +YGKV D+ + F++++D+ AEDAIR L + G + VE +K++ ++ S L V N P T ++L FE YG +I I +++AFV E EDA A+ Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLH--HYKLHGVNINVEASKNK------------------SKASTKLHVGNISPTCT-NQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAI 128 The following BLAST results are available for this feature:
BLAST of EY746559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY746559 ID=EY746559; Name=EY746559; organism=Citrus sinensis; type=EST; length=1043bpback to top |