EY688565

Overview
NameEY688565
Unique NameEY688565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_RAT (Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49
Identity = 103/229 (44.98%), Postives = 141/229 (61.57%), Query Frame = 2
Query:   11 ITNYVAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGKEK 697
            I ++   IT+L V D+ G  +DVVLGF  +E Y++   P+FG +VGRVANRI  G+F++DG EY LPIN+ PNSLHGGF+GFDKV+W       G    + F   S DGEEGYPG++ V  TYTL     + ++  A   ++ TP++L  H+Y+NLAG  S +I DH + I      PVD+  +PTG I PV+GT FD     ++G  +      G+DHN+ L   KEK
Sbjct:   33 IISWGCTITALQVKDRQGKASDVVLGFAELEGYLQ-KQPYFGAVVGRVANRIAKGRFTVDGKEYHLPINREPNSLHGGFRGFDKVLWTPQVLSNG----VQFSRVSPDGEEGYPGELKVWVTYTLDGGELV-VNYRA-QASQTTPVNLTNHSYFNLAGQGSPDIYDHEVTIAADAYLPVDETLIPTGVIAPVEGTAFDLRKPVELGKHLQSYHIHGFDHNFCLKESKEK 254          
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_PIG (Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.182e-49
Identity = 105/229 (45.85%), Postives = 139/229 (60.70%), Query Frame = 2
Query:   11 ITNYVAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGKEK 697
            I ++   IT+L V D+ G  +DVVLGF  ++ Y++   P+FG +VGRVANRI  G F+LDG EY L IN  PNSLHGG +GFDKV+W       G    I F   S DGEEGYPG++ V  TYTL     + ++  A   ++ TP++L  H+Y+NLAG  S NI DH + I      PVD+  +PTGEI PV+GT FD     ++G  + E    G+DHN+ L   KEK
Sbjct:   33 IISWGCTITALEVKDRQGRASDVVLGFAELKEYLQ-KHPYFGAVVGRVANRIAKGTFTLDGKEYKLAINNGPNSLHGGVRGFDKVLWTPRVLSNG----IEFSRVSPDGEEGYPGELKVWVTYTLDGGELV-VNYRA-QASQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIEADAFLPVDETLIPTGEIAPVQGTAFDLRKPVELGKHLQEFHINGFDHNFCLKRSKEK 254          
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_PONAB (Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.075e-49
Identity = 103/229 (44.98%), Postives = 139/229 (60.70%), Query Frame = 2
Query:   11 ITNYVAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGKEK 697
            I ++   IT+L V D+ G  +DVVLGF  +E Y++   P+FG ++GRVANRI  G F +DG EY L INK PNSLHGG +GFDKV+W       G    I F   S DGEEGYPG++ V  TYTL     + ++  A   ++ TP++L  H+Y+NLAG  S NI DH + I      PVD+  +PTGE+ PV+GT FD     ++G  + +    G+DHN+ L   KEK
Sbjct:   33 IISWGCTITALEVKDRQGRSSDVVLGFAELEGYLQ-KQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNG----IQFSRISPDGEEGYPGELKVWVTYTLDGGELV-VNYRA-QASQATPVNLTNHSYFNLAGQGSPNIYDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEK 254          
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_BOVIN (Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.055e-48
Identity = 105/229 (45.85%), Postives = 138/229 (60.26%), Query Frame = 2
Query:   11 ITNYVAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGKEK 697
            I ++   IT+L V D+ G  +DVVLGFD +E Y++   P+FG +VGRVANRI  G F+LDG EY L IN  PNSLHGG KGFDKV+W       G    + F   S DGEEGYPG++ V   YTL     + ++  A   ++ TP++L  H+Y+NLAG  S NI DH + I      PVD+  +PTGEI  V+GT FD     ++G  + E    G+DHN+ L   KEK
Sbjct:   33 IISWGCTITALEVKDRQGRASDVVLGFDELEGYLQ-KQPYFGAVVGRVANRIAKGTFTLDGKEYKLAINNGPNSLHGGVKGFDKVLWTPRVLSNG----VEFSRVSPDGEEGYPGELKVWVMYTLDGGELV-VNYRA-QASQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIEADAFLPVDEVLIPTGEIASVQGTAFDLRKPVELGKHLQEFHVNGFDHNFCLKGSKEK 254          
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_MOUSE (Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.799e-48
Identity = 102/229 (44.54%), Postives = 140/229 (61.14%), Query Frame = 2
Query:   11 ITNYVAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGKEK 697
            I ++   IT+L V D+ G  +DVVLGF  +E Y++   P+FG +VGRVANRI  G+F++ G EY LP+N+ PNSLHGGF GFDKV+W       G    + F   S DGEEGYPG++ V  TYTL     + ++  A   ++ TP++L  H+Y+NLAG  S NI DH + I      PVD+  +PTG I PV+GT FD     ++G  + +    G+DHN+ L   KEK
Sbjct:   33 IISWGCTITALQVKDRQGKASDVVLGFAELEGYLQ-KQPYFGAVVGRVANRIAKGRFTIGGKEYHLPVNREPNSLHGGFTGFDKVLWTPQVLTNG----VQFFRVSPDGEEGYPGELKVWVTYTLDGGELV-INYRA-QASQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIAADAYLPVDETLIPTGVIAPVEGTAFDLRKPVELGTHLQDYHIHGFDHNFCLKESKEK 254          
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_HUMAN (Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.799e-48
Identity = 102/229 (44.54%), Postives = 139/229 (60.70%), Query Frame = 2
Query:   11 ITNYVAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGKEK 697
            I ++   IT+L V D+ G  +DVVLGF  +E Y++   P+FG ++GRVANRI  G F +DG EY L INK PNSLHGG +GFDKV+W       G    + F   S DGEEGYPG++ V  TYTL     + ++  A   ++ TP++L  H+Y+NLAG  S NI DH + I      PVD+  +PTGE+ PV+GT FD     ++G  + +    G+DHN+ L   KEK
Sbjct:   33 IISWGCTITALEVKDRQGRASDVVLGFAELEGYLQ-KQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNG----VQFSRISPDGEEGYPGELKVWVTYTLDGGELI-VNYRA-QASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEK 254          
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_ACICA (Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.441e-39
Identity = 91/233 (39.06%), Postives = 131/233 (56.22%), Query Frame = 2
Query:   17 NYVAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAP---FFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAE-YKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNL--AGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINE-----VPGLGYDHNYVLD 682
            ++  +IT +  PD  G   ++VLGFD ++ Y          FG ++GR ANRI + KFSLDG  Y L  N  PNSLH G  GFDK VW+V     KGE    + K  S +G++G+PG + V   Y+L+     +++ +A   ++PT ++L  H+Y+NL  AG++   +LDH +Q+    I   DQN++PTGEI  V GTPFDF   K I   I         G GYD  +V++
Sbjct:   54 SFGGVITQILTPDAQGKQNNIVLGFDDLKGYEVTDTKEGIHFGGLIGRYANRIGNAKFSLDGKTYNLEKNNGPNSLHSGNPGFDKRVWQVKPLVSKGETVKASLKLTSPNGDQGFPGKLDVEVIYSLSDQNEFKIEYKA-KTDQPTVVNLTNHSYFNLSGAGNNPYGVLDHVVQLNAGRILVTDQNSLPTGEIASVAGTPFDFRMPKAIVKDIRANNQQLAYGYGYDQTWVIN 285          
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_SHIFL (Aldose 1-epimerase OS=Shigella flexneri GN=galM PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.700e-28
Identity = 74/227 (32.60%), Postives = 118/227 (51.98%), Query Frame = 2
Query:   11 ITNYVAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIG----ASINEVPGLGYDHNYVL 679
            + ++ A + S  +P   G+  + +LG  S E Y   AA F G  +GR ANRI + +++ DG   TL  ++  N LHGG +GFDK  W++       +  + F   S DG++G+PG++     Y LT    + +   A  + KP P+++  H Y+NL G  S ++ +H +QI      PVD+  +P   +  V GT FDF + K I     A  ++    GYDH ++L
Sbjct:   30 LMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAA-FLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQ---NDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITYRATVD-KPCPVNMTNHVYFNLDGEQS-DVRNHKLQILADEYLPVDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLL 250          
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_ECOLI (Aldose 1-epimerase OS=Escherichia coli (strain K12) GN=galM PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.700e-28
Identity = 74/227 (32.60%), Postives = 118/227 (51.98%), Query Frame = 2
Query:   11 ITNYVAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIG----ASINEVPGLGYDHNYVL 679
            + ++ A + S  +P   G+  + +LG  S E Y   AA F G  +GR ANRI + +++ DG   TL  ++  N LHGG +GFDK  W++       +  + F   S DG++G+PG++     Y LT    + +   A  + KP P+++  H Y+NL G  S ++ +H +QI      PVD+  +P   +  V GT FDF + K I     A  ++    GYDH ++L
Sbjct:   30 LMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAA-FLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQ---NDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITYRATVD-KPCPVNMTNHVYFNLDGEQS-DVRNHKLQILADEYLPVDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLL 250          
BLAST of EY688565 vs. ExPASy Swiss-Prot
Match: GALM_HAEIN (Aldose 1-epimerase OS=Haemophilus influenzae GN=galM PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.387e-24
Identity = 66/194 (34.02%), Postives = 106/194 (54.64%), Query Frame = 2
Query:  128 FFGCIVGRVANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSG-NILDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASI---NEVPGLGYDHNYVLDCGKEK 697
            + G  VGR ANRI + +F L+G    L  N+  + LHGG +GFDK  W + E   GEN  + F   S DG++G+PG+V V  TYTLT   +++++   + + K T ++L  HTY+NL     G ++ +H++++      PVD   +P   +  V  T FDF   K I       ++    GYDH+++++   +K
Sbjct:   66 YLGASVGRYANRIANAQFELNGELIKLSSNQGKHQLHGG-EGFDKRRWNIQEC--GEN-FVCFSLHSVDGDQGFPGNVDVSVTYTLTGDNSVKIEYAGMCD-KDTALNLTNHTYFNLENAEQGSDVREHTLRLNADFYLPVDNEGIPNSPLKHVVNTSFDFRIAKPIKQDFLQGDQQATKGYDHSFIVNKAWQK 254          
The following BLAST results are available for this feature:
BLAST of EY688565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GALM_RAT4.734e-4944.98Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE... [more]
GALM_PIG6.182e-4945.85Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1[more]
GALM_PONAB8.075e-4944.98Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV... [more]
GALM_BOVIN1.055e-4845.85Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1[more]
GALM_MOUSE1.799e-4844.54Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV... [more]
GALM_HUMAN1.799e-4844.54Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV... [more]
GALM_ACICA4.441e-3939.06Aldose 1-epimerase OS=Acinetobacter calcoaceticus ... [more]
GALM_SHIFL2.700e-2832.60Aldose 1-epimerase OS=Shigella flexneri GN=galM PE... [more]
GALM_ECOLI2.700e-2832.60Aldose 1-epimerase OS=Escherichia coli (strain K12... [more]
GALM_HAEIN1.387e-2434.02Aldose 1-epimerase OS=Haemophilus influenzae GN=ga... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-089-F01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688565 ID=EY688565; Name=EY688565; organism=Citrus sinensis; type=EST; length=841bp
TGCAAGCAAAATTACCAATTATGTTGCCATTATCACCTCACTTTCTGTAC
CTGACAAACATGGAAATTGGGCTGACGTTGTTCTTGGATTCGACTCTGTC
GAACCATACGTGAAAGGTGCTGCACCTTTTTTTGGCTGCATTGTGGGTAG
GGTTGCTAACAGAATTAAAGATGGGAAGTTTTCTCTCGACGGGGTTGAAT
ACACTTTGCCCATCAACAAGCCACCAAACAGTCTCCATGGTGGGTTCAAG
GGTTTTGATAAAGTTGTCTGGGAGGTAGCAGAATATAAGAAAGGTGAAAA
CCCTTCCATTACTTTCAAGTATCGCAGCCGTGATGGCGAGGAAGGTTACC
CAGGGGATGTTTCTGTGATGGCAACCTACACACTAACATCAAGCACGACA
ATGAGGCTTGACATGGAAGCAGTTCCAGAAAACAAGCCGACCCCAATCAG
TTTAGCTCAACACACGTACTGGAACTTAGCAGGCCATCATTCAGGGAACA
TACTTGACCACTCAATTCAAATATGGGGATCACACATTACTCCTGTAGAT
CAGAACACGGTCCCAACTGGAGAAATTATGCCAGTCAAGGGCACCCCTTT
TGATTTCACCACTGAGAAAAAGATTGGTGCATCAATCAATGAAGTACCTG
GTTTAGGGTATGATCACAACTATGTTCTTGATTGTGGAAAAGAGAAATCA
GGTCTGAAACATGGCTGCAAACTGAAGGAACCCTCCACCCTCCAGGGTCC
TTAATTTATGGGACCAATGCCCCAGGGCATGCAGTTTTAACCCTGGGTAA
CTATGTTTAAGGGGATTTGTTGGAAAAAGGGGGGGGGCAAT
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