EY688515

Overview
NameEY688515
Unique NameEY688515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688515 vs. ExPASy Swiss-Prot
Match: POL_CAMVS (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) GN=ORF V PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.757e-22
Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = -2
Query:    1 YKWKVVPFGVKQAPGIFQRHMDQVFKEFRSFACVYVDDLLVFSN 132
            Y+W VVPFG+KQAP IFQRHMD+ F+ FR F CVYVDD+LVFSN
Sbjct:  367 YEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSN 410          

HSP 2 Score: 47.3654 bits (111), Expect = 2.757e-22
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = -1
Query:  140 YSSFDFKSRF*QVMLDEESQPLTAFSCPQ 226
            +SSFD KS F QV+LD+ES+PLTAF+CPQ
Sbjct:  336 FSSFDCKSGFWQVLLDQESRPLTAFTCPQ 364          
BLAST of EY688515 vs. ExPASy Swiss-Prot
Match: POL_CAMVE (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) GN=ORF V PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.757e-22
Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = -2
Query:    1 YKWKVVPFGVKQAPGIFQRHMDQVFKEFRSFACVYVDDLLVFSN 132
            Y+W VVPFG+KQAP IFQRHMD+ F+ FR F CVYVDD+LVFSN
Sbjct:  367 YEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSN 410          

HSP 2 Score: 47.3654 bits (111), Expect = 2.757e-22
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = -1
Query:  140 YSSFDFKSRF*QVMLDEESQPLTAFSCPQ 226
            +SSFD KS F QV+LD+ES+PLTAF+CPQ
Sbjct:  336 FSSFDCKSGFWQVLLDQESRPLTAFTCPQ 364          
BLAST of EY688515 vs. ExPASy Swiss-Prot
Match: POL_CAMVC (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) GN=ORF V PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.757e-22
Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = -2
Query:    1 YKWKVVPFGVKQAPGIFQRHMDQVFKEFRSFACVYVDDLLVFSN 132
            Y+W VVPFG+KQAP IFQRHMD+ F+ FR F CVYVDD+LVFSN
Sbjct:  367 YEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSN 410          

HSP 2 Score: 47.3654 bits (111), Expect = 2.757e-22
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = -1
Query:  140 YSSFDFKSRF*QVMLDEESQPLTAFSCPQ 226
            +SSFD KS F QV+LD+ES+PLTAF+CPQ
Sbjct:  336 FSSFDCKSGFWQVLLDQESRPLTAFTCPQ 364          
BLAST of EY688515 vs. ExPASy Swiss-Prot
Match: POL_CAMVD (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) GN=ORF V PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.757e-22
Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = -2
Query:    1 YKWKVVPFGVKQAPGIFQRHMDQVFKEFRSFACVYVDDLLVFSN 132
            Y+W VVPFG+KQAP IFQRHMD+ F+ FR F CVYVDD+LVFSN
Sbjct:  362 YEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSN 405          

HSP 2 Score: 47.3654 bits (111), Expect = 2.757e-22
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = -1
Query:  140 YSSFDFKSRF*QVMLDEESQPLTAFSCPQ 226
            +SSFD KS F QV+LD+ES+PLTAF+CPQ
Sbjct:  331 FSSFDCKSGFWQVLLDQESRPLTAFTCPQ 359          
BLAST of EY688515 vs. ExPASy Swiss-Prot
Match: POL_CAMVN (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) GN=ORF V PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.070e-22
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = -2
Query:    1 YKWKVVPFGVKQAPGIFQRHMDQVFKEFRSFACVYVDDLLVFSN 132
            Y+W VVPFG+KQAP IFQRHMD+ F+ FR F CVYVDD++VFSN
Sbjct:  368 YEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDIVVFSN 411          

HSP 2 Score: 47.3654 bits (111), Expect = 6.070e-22
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = -1
Query:  140 YSSFDFKSRF*QVMLDEESQPLTAFSCPQ 226
            +SSFD KS F QV+LD+ES+PLTAF+CPQ
Sbjct:  337 FSSFDCKSGFWQVLLDQESRPLTAFTCPQ 365          
BLAST of EY688515 vs. ExPASy Swiss-Prot
Match: POL_COYMV (Putative polyprotein OS=Commelina yellow mottle virus PE=4 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 2.704e-13
Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = -2
Query:    4 YKWKVVPFGVKQAPGIFQRHMDQVFKEFRSFACVYVDDLLVFS 132
            Y+W V+PFG+K AP IFQR MD VFK    F  VY+DD+LVFS
Sbjct: 1530 YEWLVMPFGLKNAPAIFQRKMDNVFKGTEKFIAVYIDDILVFS 1572          

HSP 2 Score: 33.8834 bits (76), Expect = 2.704e-13
Identity = 16/25 (64.00%), Postives = 18/25 (72.00%), Query Frame = -1
Query:  152 YSSFDFKSRF*QVMLDEESQPLTAF 226
            YS FD KS F QV ++EES P TAF
Sbjct: 1499 YSKFDLKSGFWQVAMEEESVPWTAF 1523          
BLAST of EY688515 vs. ExPASy Swiss-Prot
Match: POL_CYLCV (Enzymatic polyprotein OS=Cestrum yellow leaf curling virus GN=ORF V PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.025e-12
Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = -2
Query:    1 YKWKVVPFGVKQAPGIFQRHMDQVFKEFRSFACVYVDDLLVFSN 132
            Y+W V+PFG+KQAPGI+Q  MD+  +   +F   Y+DD+LVF+N
Sbjct:  324 YQWNVLPFGLKQAPGIYQNFMDKNLEGLENFCLAYIDDILVFTN 367          

HSP 2 Score: 35.4242 bits (80), Expect = 1.025e-12
Identity = 15/29 (51.72%), Postives = 22/29 (75.86%), Query Frame = -1
Query:  143 YYSSFDFKSRF*QVMLDEESQPLTAFSCP 229
            ++S+ D KS + Q+ L  +S+PLTAFSCP
Sbjct:  291 WFSTLDAKSGYWQLRLHPQSKPLTAFSCP 319          
BLAST of EY688515 vs. ExPASy Swiss-Prot
Match: POL_SOCMV (Enzymatic polyprotein OS=Soybean chlorotic mottle virus GN=ORF V PE=3 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 1.807e-11
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = -2
Query:    4 YKWKVVPFGVKQAPGIFQRHMDQVFKEFRSFACVYVDDLLVFS 132
            Y+W V+ FG+KQAP I+QR MDQ  K        Y+DD+L+F+
Sbjct:  325 YEWNVLSFGLKQAPSIYQRFMDQSLKGLEHICLAYIDDILIFT 367          

HSP 2 Score: 36.965 bits (84), Expect = 1.807e-11
Identity = 16/29 (55.17%), Postives = 22/29 (75.86%), Query Frame = -1
Query:  143 YYSSFDFKSRF*QVMLDEESQPLTAFSCP 229
            ++SS D KS + Q+ L E ++PLTAFSCP
Sbjct:  292 WFSSLDAKSGYYQLRLHENTKPLTAFSCP 320          
The following BLAST results are available for this feature:
BLAST of EY688515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
POL_CAMVS2.757e-2275.00Enzymatic polyprotein OS=Cauliflower mosaic virus ... [more]
POL_CAMVE2.757e-2275.00Enzymatic polyprotein OS=Cauliflower mosaic virus ... [more]
POL_CAMVC2.757e-2275.00Enzymatic polyprotein OS=Cauliflower mosaic virus ... [more]
POL_CAMVD2.757e-2275.00Enzymatic polyprotein OS=Cauliflower mosaic virus ... [more]
POL_CAMVN6.070e-2272.73Enzymatic polyprotein OS=Cauliflower mosaic virus ... [more]
POL_COYMV2.704e-1362.79Putative polyprotein OS=Commelina yellow mottle vi... [more]
POL_CYLCV1.025e-1252.27Enzymatic polyprotein OS=Cestrum yellow leaf curli... [more]
POL_SOCMV1.807e-1148.84Enzymatic polyprotein OS=Soybean chlorotic mottle ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-072-G11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688515 ID=EY688515; Name=EY688515; organism=Citrus sinensis; type=EST; length=841bp
ATTGCTAAATACTAATAGATCATCTACATATACACATGCAAATGATCTAA
ATTCCTTAAATACTTGGTCCATATGTCTTTGAAATATTCCTGGTGCTTGT
TTTACTCCGAAAGGTACTACCTTCCATTTGTATTTGTACTTGAGGGCAAC
TAAATGCTGTCAGAGGTTGTGATTCCTCATCTAACATTACTTGTCAAAAT
CTTGATTTAAAGTCAAAACTAGAATAGTAGGGCTGGGCAAAAAAACCCAT
CCGATCGGAGCCAACCTGATTCGAAAAATATCGGGTTCGGATCGGATTGT
TCAACAAATCCGTTCAGATAGCATTTTGCCAACCTGATCGGGTTGTGATC
GGATTAGGTTGGCTAAAAAAAAAAAAATATAATTTATTTACAAAAGCAAT
TGATTAAACGGCAAACATGGTGCCATGACACACACAACAGAACAGCACAA
TAGAGTCATGTCTTCACACAGTCACACGCGCAGCGGCAGCCAGTGGCATT
AACCAAACACGGCACGGCAGACACTGATGCTGAGACGCAGACGGCACGGC
AGCAAAGCAGCCCTGGCACGGTCCAATGCATCTGCACAAACCCATCGCGA
TCCACGACGAGGCGACGCGATCTGCTGCCCTGCACCGCGACCGCTGCTGC
CACTGGATCCACTGGCCACCGCAATTTGTTGCCCTCCACTCAATCATGAA
TCTGCTCTTCTAATACATAATCTATGTGGGTGGCCTTGTGGAAGGTGAAT
GGTTAAAAAAAACATTTCCCCTGGAAACAAGCATTAAACCATGGAAAAAA
TAAACCTGAAACCTTTTGGTGAAATTTTGGATGTATTTGAA
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