EY711541

Overview
NameEY711541
Unique NameEY711541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: AP2_ARATH (Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana GN=AP2 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.689e-58
Identity = 108/167 (64.67%), Postives = 126/167 (75.45%), Query Frame = 1
Query:  346 MKKTRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYRGVTLHKCGRWEARMGQYLGRKYVYLXLYNXXXXXXXXXXXXXXXCIGRXAVTNLIPLI 846
            +KK+RRGPRS+SSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDT            IKFRGV+ADINF++DDY DD++ M+N TK+EFV+ LRRQ+T    RG+SKYRGVTLHKCGRWEARMGQ+LG+KYVYL L++               C G+ AVTN  P I
Sbjct:  118 LKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIDDYDDDLKQMTNLTKEEFVHVLRRQST-GFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPSI 283          
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: TOE3_ARATH (AP2-like ethylene-responsive transcription factor TOE3 OS=Arabidopsis thaliana GN=TOE3 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.312e-55
Identity = 103/167 (61.68%), Postives = 123/167 (73.65%), Query Frame = 1
Query:  346 MKKTRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYRGVTLHKCGRWEARMGQYLGRKYVYLXLYNXXXXXXXXXXXXXXXCIGRXAVTNLIPLI 846
            +KK+RRGPRS+SSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDT            IKFRGVDADINF ++DY DD++ M N TK+EF++ LRRQ+T    RG+SKYRGVTLHKCGRWE+R+GQ+L +KYVYL L++               C G+ AVTN  P +
Sbjct:   83 IKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLKQMGNLTKEEFMHVLRRQST-GFPRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKV 248          
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: RAP27_ARATH (Ethylene-responsive transcription factor RAP2-7 OS=Arabidopsis thaliana GN=RAP2-7 PE=2 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 7.451e-51
Identity = 94/131 (71.76%), Postives = 110/131 (83.97%), Query Frame = 1
Query:  343 QMKKTRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYRGVTLHKCGRWEARMGQYLGRK 735
            Q+KK+RRGPRS+SSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDT            IKFRGVDADINF + DY++D++ + N +K+EFV+ LRRQ+T   SRG+SKYRGVTLHKCGRWEARMGQ+LG+K
Sbjct:  139 QVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFTLGDYEEDMKQVQNLSKEEFVHILRRQST-GFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 268          
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: TOE2_ARATH (AP2-like ethylene-responsive transcription factor TOE2 OS=Arabidopsis thaliana GN=TOE2 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.722e-39
Identity = 78/128 (60.94%), Postives = 96/128 (75.00%), Query Frame = 1
Query:  346 MKKTRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYRGVTLHKCGRWEARMGQYLG 729
            +KK+RRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDT            +KFRG++ADINF + DY++D++ M+N +K+E V  LRRQ ++  SR  S+Y+GV L K G W A+M Q  G
Sbjct:  147 VKKSRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAVKFRGLEADINFVIGDYEEDLKQMANLSKEEVVQVLRRQ-SSGFSRNNSRYQGVALQKIGGWGAQMEQLHG 273          
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: SMZ_ARATH (AP2-like ethylene-responsive transcription factor SMZ OS=Arabidopsis thaliana GN=SMZ PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.836e-39
Identity = 78/122 (63.93%), Postives = 94/122 (77.05%), Query Frame = 1
Query:  340 RQMKKTRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYRGVTLHKCGRWE 705
            + +KK+RRGPRS+SSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDT            IKFRG+DADINF VDDY+ DI  M N  K EFV +LRR+ +A+  RG+SKY+G+ L KC +++
Sbjct:  107 KMVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDADINFVVDDYRHDIDKMKNLNKVEFVQTLRRE-SASFGRGSSKYKGLALQKCTQFK 227          
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: SNZ_ARATH (AP2-like ethylene-responsive transcription factor SNZ OS=Arabidopsis thaliana GN=SNZ PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.389e-35
Identity = 72/108 (66.67%), Postives = 83/108 (76.85%), Query Frame = 1
Query:  349 KKTRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYR 672
            KK+RRGPRS+SS YRGVTFYRRTGRWESHIWDCGKQVYLGGFDT            I+FRG+ ADINF VDDY+ DI  M N +K+EFV SLRR  +A+ +RG SKY+
Sbjct:   96 KKSRRGPRSRSSHYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYTAARAYDRAAIRFRGLQADINFIVDDYKQDIEKMKNLSKEEFVQSLRRA-SASLARGGSKYK 202          
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: WRI1_ARATH (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana GN=WRI1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 67/163 (41.10%), Postives = 88/163 (53.99%), Query Frame = 1
Query:  376 KSSQYRGVTFYRRTGRWESHIWDC----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYRGVTL-HKCGRWEARMGQYLGRKYVYLXLYNXXXXXXXXXXXXXXXCIGRXAVTN 831
            +SS YRGVT +R TGR+E+H+WD           GKQVYLG +D+            +K+ G D  +NF  + Y  ++  M   TK+E++ SLRRQ ++  SRG SKYRGV   H  GRWEAR+G+  G KY+YL  YN                 G  AVTN
Sbjct:   62 RSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTKEEYLASLRRQ-SSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTN 223          
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: AP2L1_ARATH (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana GN=At1g16060 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.043e-24
Identity = 61/150 (40.67%), Postives = 91/150 (60.67%), Query Frame = 1
Query:  340 RQMKKTRRGPRSKSSQYRGVTFYRRTGRWESHIWDC----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYRGVTL-HKCGRWEARMGQYLGRKYVYLXLY 756
            ++  + R  P  +SS +RGVT +R TGR+E+H+WD           G+QVYLG +D             +K+ G D  +NF + +Y++DI+ M + +K+E++ SLRR+ ++  SRG SKYRGV   H  GRWEAR+G+  G KY+YL  Y
Sbjct:   43 KRRSQPRDAPPQRSSVHRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAALKYWGRDTILNFPLCNYEEDIKEMESQSKEEYIGSLRRK-SSGFSRGVSKYRGVAKHHHNGRWEARIGRVFGNKYLYLGTY 191          
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: ANT_ARATH (AP2-like ethylene-responsive transcription factor ANT OS=Arabidopsis thaliana GN=ANT PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23
Identity = 63/163 (38.65%), Postives = 87/163 (53.37%), Query Frame = 1
Query:  376 KSSQYRGVTFYRRTGRWESHIWDC----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYRGVTL-HKCGRWEARMGQYLGRKYVYLXLYNXXXXXXXXXXXXXXXCIGRXAVTN 831
            ++SQYRGVT +R TGR+E+H+WD           G+QVYLGG+D             +K+ G     NF  ++YQ +I  M N T+ E+V  LRR+ ++  SRG S YRGVT  H+ GRW+AR+G+  G K +YL  +                  G  AVTN
Sbjct:  280 RTSQYRGVTRHRWTGRYEAHLWDNSFKKEGHSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHTNFSAENYQKEIEDMKNMTRQEYVAHLRRK-SSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDVAAIKFRGTNAVTN 441          
BLAST of EY711541 vs. ExPASy Swiss-Prot
Match: AIL1_ARATH (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana GN=AIL1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23
Identity = 63/163 (38.65%), Postives = 90/163 (55.21%), Query Frame = 1
Query:  376 KSSQYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXXIKFRGVDADINFHVDDYQDDIRIMSNFTKDEFVYSLRRQNTAAASRGTSKYRGVTL-HKCGRWEARMGQYLGRKYVYLXLYNXXXXXXXXXXXXXXXCIGRXAVTN 831
            ++SQYRGVT +R TGR+E+H+WD  C        G+QVYLGG+D             +K+ G    +NF + +Y+ +I  ++N  + EFV  LRR N++  SRG S YRGVT  H+ GRW+AR+G+  G K +YL  ++                 G  AVTN
Sbjct:  220 RTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQEFVAMLRR-NSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTN 381          
The following BLAST results are available for this feature:
BLAST of EY711541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
AP2_ARATH3.689e-5864.67Floral homeotic protein APETALA 2 OS=Arabidopsis t... [more]
TOE3_ARATH1.312e-5561.68AP2-like ethylene-responsive transcription factor ... [more]
RAP27_ARATH7.451e-5171.76Ethylene-responsive transcription factor RAP2-7 OS... [more]
TOE2_ARATH1.722e-3960.94AP2-like ethylene-responsive transcription factor ... [more]
SMZ_ARATH3.836e-3963.93AP2-like ethylene-responsive transcription factor ... [more]
SNZ_ARATH4.389e-3566.67AP2-like ethylene-responsive transcription factor ... [more]
WRI1_ARATH7.023e-2541.10Ethylene-responsive transcription factor WRI1 OS=A... [more]
AP2L1_ARATH2.043e-2440.67AP2-like ethylene-responsive transcription factor ... [more]
ANT_ARATH8.585e-2338.65AP2-like ethylene-responsive transcription factor ... [more]
AIL1_ARATH8.585e-2338.65AP2-like ethylene-responsive transcription factor ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-H06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711541 ID=EY711541; Name=EY711541; organism=Citrus sinensis; type=EST; length=905bp
CATTCCTCCGTCGTCACCTCCGTCGGTGACTGCTGCTCCCCTGCTTCCTC
CTCCGGAGGTTACATTTTCAGTATACTGAAAGATTCTAACAACAACAGTG
GCAGCAACCAAAACGATCACCACCACCACCAGCATCACTATCAAAACGAC
AATGTTTTAACTCAAGGCGGCGGCGGAGGCGGCGGTGGAGGCAGCAGCGG
CATTCCGTTTATTCCGTTAATAATAAACACAGAAGTAGAAGAAGAAGAAG
AAGGTAACAACAATAACGATGATGAAAGGGACAGGGTAGCTTCACTATCA
CAGCAACAGGAGGTTCAGATTCAGCAGCACAGCCATAGTAGACAAATGAA
GAAAACTAGACGTGGGCCTAGGTCTAAAAGTTCTCAGTACAGAGGCGTTA
CCTTCTACAGAAGAACGGGAAGATGGGAATCTCACATTTGGGATTGTGGG
AAGCAAGTCTATTTGGGGGGATTTGACACAGCTCTTGCAGCGGCCAGGGC
TTATGATCGAGCTGCTATAAAGTTTAGGGGAGTTGATGCAGACATCAATT
TTCACGTTGATGATTATCAAGACGATATAAGAATTATGAGTAATTTTACA
AAAGATGAATTCGTGTATTCTCTCCGCCGCCAGAACACTGCAGCAGCTAG
CAGGGGAACTTCAAAATATAGGGGAGTCACGCTGCACAAATGTGGCCGGT
GGGAAGCTCGCATGGGGCAGTATCTGGGCAGGAAGTATGTTTACTTANGG
CTATACAATAGTGAAGAGGAAGCTGCAAGGGCTTATGACAGGGCTGNNTC
TGAATGCATTGGGAGANGAGCAGTCACAAATTTGATCCCACTCATATGAT
GAGAATCGATCTATGGGACAACCCTGNCGAGGGCGACACGAAGTGATCTA
AATTA
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