EY711349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY711349 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 8.240e-15 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 1 Query: 145 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQY 252 GK AQQ+N+PVPEGCTDP AENFDPTARSDDG+C Y Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472 HSP 2 Score: 30.0314 bits (66), Expect = 8.240e-15 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 57 ALGEANADAIQSGNFYG 107 ALG+ANADAI G FYG Sbjct: 421 ALGDANADAIGRGTFYG 437
BLAST of EY711349 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.473e-13 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 142 GGKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQY 252 GG+AAQQ+ NVPVPEGCTDP A N+DPTARSDDGSC Y Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474 HSP 2 Score: 28.8758 bits (63), Expect = 2.473e-13 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 57 ALGEANADAIQSGNFYG 107 ALG+AN DAI+ G FYG Sbjct: 421 ALGDANNDAIKRGTFYG 437
BLAST of EY711349 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 3.215e-13 Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 145 GKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQYT 255 G+ AQQ N+PVPEGCTDP A+NFDPTARSDDGSC YT Sbjct: 428 GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465 HSP 2 Score: 30.0314 bits (66), Expect = 3.215e-13 Identity = 11/17 (64.71%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 ALGEANADAIQSGNFYG 107 ALG+AN+DA+++G+FYG Sbjct: 412 ALGDANSDAMKTGSFYG 428
BLAST of EY711349 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 1.187e-12 Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 145 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYTL 258 GKAAQQ+++PV +GCTDP A+N+DPTARSDDGSC Y L Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472 HSP 2 Score: 27.335 bits (59), Expect = 1.187e-12 Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3 Query: 57 ALGEANADAIQSGNFYG 107 ALG+AN DAI G F+G Sbjct: 419 ALGDANKDAIDRGTFFG 435
BLAST of EY711349 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.188e-12 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 1 Query: 145 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYT 255 GK AQQ +PVPEGCTD A+N+DPTARSDDGSC YT Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463 HSP 2 Score: 29.261 bits (64), Expect = 1.188e-12 Identity = 11/17 (64.71%), Postives = 16/17 (94.12%), Query Frame = 3 Query: 57 ALGEANADAIQSGNFYG 107 ALG+AN DA+++G+FYG Sbjct: 411 ALGDANQDAMKTGSFYG 427 The following BLAST results are available for this feature:
BLAST of EY711349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711349 ID=EY711349; Name=EY711349; organism=Citrus sinensis; type=EST; length=444bpback to top |